Simulation problem
From: "MANOJ KHURANA"
Subject: [NMusers] Simulation problem
Date: Mon, November 22, 2004 1:42 pm
Dear Group,
Continuing my crawls I have another querry if someone can suggest me how
to perform PKPD simulation using NONMEM (If possible w.r.to PDX-POP) and
what changes need to be incorporated in the data set (an example of data
set arrangement and Control Stream file would be of real help). Below is
the ctl stream I wrote but its not running so obviously there is something
wrong that I am doing, kindly correct me. Can we perform estimation as
well as simulation simultaneously. Also please advice me on how to perform
individual simulation versus population simulation using NONMEM? I tried
FIXING THETAs, REMOVING ETAs as well as OMEGA BLOCK for individual simulation
but run aborts with a msg that "sigma record found without omega record".
Thanks in advance
Manoj Khurana
$PROB RUN# 001
$INPUT C ID EVID TIME DV TYPE AMT
$DATA 001.CSV IGNORE=C
$SUBROUTINES ADVAN4 TRANS4
$PK
TVCL=THETA(1)
CL=TVCL*EXP(ETA(1))
TVV2=THETA(2)
V2=TVV2*EXP(ETA(2))
TVQ=THETA(3)
Q=TVQ*EXP(ETA(3))
TVV3=THETA(4)
V3=TVV3*EXP(ETA(4))
TVKA=THETA(5)
KA=TVKA*EXP(ETA(5))
S2=V2/1000
$ERROR
IPRED=F
EMAX=THETA(6)+ETA(6)
EC50=THETA(7)+ETA(7)
E=(EMAX*F)/(EC50+F)
Y=F*(1+ERR(1))
IF (TYPE.EQ.2) THEN
Y=E+ERR(2)
ENDIF
$THETA
(10, FIX) ;CL
(100, FIX) ;V2
(12, FIX) ;Q
(120, FIX) ;V3
(2, FIX) ;KA
(100, FIX) ;EMAX
(10, FIX) ;EC50
$OMEGA
0.03 FIX
0.08 FIX
0.3 FIX
0.13 FIX
0.99 FIX
0.7 FIX
0.01 FIX
$SIGMA
0.02 FIX
1.6 FIX
$SIMULATION (2674474) ONLYSIMULATION
$TABLE ID TIME IPRED TYPE NOPRINT ONEHEADER FILE=001.TAB