RE: Describing variability

From: Kenneth Kowalski Date: April 01, 2003 technical Source: cognigencorp.com
From:"Kowalski, Ken" Subject: RE: [NMusers] Describing variability Date: Tue, 1 Apr 2003 12:15:00 -0500 Bill, My comments are imbedded below. Ken
Quoted reply history
-----Original Message----- From: Bachman, William [mailto:bachmanw@globomax.com] Sent: Tuesday, April 01, 2003 11:23 AM To: 'Kowalski, Ken'; Bachman, William; 'Diane R Mould'; VPIOTROV@PRDBE.jnj.com; n.holford@auckland.ac.nz; nmusers@globomaxnm.com Subject: RE: [NMusers] Describing variability Ken, While those are all certainly good suggestions (and I highly recommend them), there are still some relatively simple models (read as not over-parameterized) where you won't get a successful $COV (e.g when sampling is limited and there is just no way you're going to get any more or better data, like pediatric studies.) [Kowalski, Ken] An over-parameterized model arises when the data cannot support estimating all of the parameters regardless of the reason. In your example above, the over-parameterization is a result of the limitations of the design. An over-parameterized model may be considered a simple model with the right set of data but with a limited set of data it can be overly complex. For example, a dose-response might be correctly described by a simple Emax model, however, if we only test doses in a narrow range, say in the linear range of the dose-response, there may be an infinite combination of estimates of Emax and ED50 that will provide a good fit to the dose-response. Certainly as a descriptive summary of the dose-response the over-parameterized model fit may be fine but I would be extremely cautious in using these estimates to guide dose selection for a future study particularly if I was planning to extrapolate to higher doses. Should you not use the model for any purpose? I don't think so. It may still be adequate for descriptive purposes [Kowalski, Ken] Agreed, see comment above. or planning of further studies. [Kowalski, Ken] Using over-parameterized models for planning further studies should be done cautiously recognizing the limitations of the parameters estimates and the problems in using the model to extrapolate. $COV is a bonus in that it gives you added confidence that you have not found a local minimum (as well as estimates of the standard errors, etc). If the situation warrants, certainly take a Bayesian approach or do extensive simulation studies, but I don't think that's ALWAYS necessary, do you? You have implied that I don't think successful convergence or $COV is ever needed or desired. The point I'm trying to make is that some sort of balanced approach can be taken and sometimes, you have to "go with what you got." [Kowalski, Ken] I wouldn't put it that way. A bonus makes it sound like we don't need to strive to obtain stable models. To the contrary, that should be the norm. I do recognize that desperate times may call for desperate measures I'm just concerned that we're sending the wrong message that trivializes the importance of convergence and $COV step. Bill
Mar 27, 2003 Justin Wilkins Describing variability
Mar 27, 2003 Atul Bhattaram Venkatesh RE: Describing variability
Mar 27, 2003 Nick Holford Re: Describing variability
Mar 31, 2003 Justin Wilkins RE: Describing variability
Mar 31, 2003 Atul Bhattaram Venkatesh RE: Describing variability
Mar 31, 2003 Nick Holford Re: Describing variability
Apr 01, 2003 Vladimir Piotrovskij RE: Describing variability
Apr 01, 2003 Leonid Gibiansky RE: Describing variability
Apr 01, 2003 Diane Mould RE: Describing variability
Apr 01, 2003 William Bachman RE: Describing variability
Apr 01, 2003 Sam Liao RE: Describing variability
Apr 01, 2003 Kenneth Kowalski RE: Describing variability
Apr 01, 2003 William Bachman RE: Describing variability
Apr 01, 2003 Diane Mould RE: Describing variability
Apr 01, 2003 Leonid Gibiansky RE: Describing variability
Apr 01, 2003 Kenneth Kowalski RE: Describing variability
Apr 01, 2003 Diane Mould RE: Describing variability
Apr 01, 2003 Kenneth Kowalski RE: Describing variability
Apr 01, 2003 Kenneth Kowalski RE: Describing variability
Apr 01, 2003 Stephen Duffull RE: Describing variability
Apr 02, 2003 Kenneth Kowalski RE: Describing variability
Apr 02, 2003 Leonid Gibiansky RE: Describing variability
Apr 02, 2003 William Bachman RE: Describing variability
Apr 02, 2003 William Bachman RE: Describing variability
Apr 02, 2003 Leonid Gibiansky RE: Describing variability
Apr 02, 2003 Scott VanWart RE: Describing variability
Apr 02, 2003 Kenneth Kowalski RE: Describing variability
Apr 02, 2003 Kenneth Kowalski RE: Describing variability
Apr 02, 2003 Matt Hutmacher RE: Describing variability
Apr 02, 2003 Kenneth Kowalski RE: Describing variability
Apr 02, 2003 Atul Bhattaram Venkatesh RE: Describing variability
Apr 03, 2003 Vladimir Piotrovskij RE: Describing variability
Apr 03, 2003 Vladimir Piotrovskij Date:Thu, 3 Apr 2003 09:46:19 +0200