Re: metabolite modeling

From: Lewis B. Sheiner Date: December 17, 1999 technical Source: cognigencorp.com
Date: Fri, 17 Dec 1999 09:41:37 -0800 From: Lewis B Sheiner <lewis@c255.ucsf.edu> Subject: Re: metabolite modeling Just so! Thanks for such a clear and succinct statement. LBS. "Jean-Xavier.Mazoit@kb.u-psud.fr" wrote: > > Dear all, > I followed with interest the debate about metabolite and identifiability of > parameters (I am currently fitting morphine and glucuronide data using a > similar model). Indeed, it is evident that the model presented by Dick is > not fully identifiable. However, I am slightly astonished by all the > discussions and arguments presented: > In fact, the problem relates only to the difference between intensive and > extensive variables. Rates are rates and concentrations are amounts > divided by volumes. The linearity of the system and the principle of > superposition tell us that concentration is proportional to the dose and > inversely proportional to the volume. It is impossible to calculate > volumes from concentrations without knowing the dose (for metabolites, the > faction of the dose metabolised by the system). In other words, in a > simple one compartment model, it is impossible to estimate the volume if > the dose is unknown. On another hand, it is always possible to estimate > half-life (or rate constant, or time constant) which is a basic parameter, > contrary to Nick Holford's opinion. Also, it seems that there is a > frequent confusion between identifiability which as an intrinsic property > of the system and sensitivity. With that respect, I think that most > considerations presented in David Bourne's course on identifiability deal > with sensitivity rather than with identifiability. > > Jean Xavier Mazoit MD, PhD > Laboratoire d'Anesthésie > Université Paris-Sud > Faculté de Médecine du Kremlin-Bicêtre > F-94276 Bicêtre France > Tel. (33) (0)1 49 59 67 35-37 > (33) (0)1 45 21 34 41 (Hopital) > Fax (33) (0)1 45 21 28 75 > e-mail Jean-Xavier.Mazoit@kb.u-psud.fr -- Lewis B Sheiner Professor, Lab. Med., Biopharmaceut. Sci, Med. Box 0626 - UCSF 415-476-1965 (voice) San Francisco, CA 415-476-2796 (fax) 94143 lewis@c255.ucsf.edu
Dec 09, 1999 Dick Wixley metabolite modelling
Dec 09, 1999 Stephen Duffull Re: metabolite modelling
Dec 09, 1999 Alison Boeckmann Re: metabolite modelling
Dec 09, 1999 Matt Hutmacher RE: metabolite modeling
Dec 09, 1999 David Bourne RE: metabolite modeling
Dec 09, 1999 Stephen Duffull Re: metabolite modeling
Dec 09, 1999 Matt Hutmacher RE: metabolite modeling
Dec 10, 1999 Mats Karlsson Re: metabolite modeling
Dec 10, 1999 Matt Hutmacher RE: metabolite modeling
Dec 10, 1999 Sandra R B Allerheiligen RE: metabolite modeling
Dec 13, 1999 Leon Aarons RE: metabolite modeling
Dec 13, 1999 Nick Holford Re: metabolite modeling
Dec 16, 1999 Stephen Duffull Re: metabolite modeling
Dec 17, 1999 Vladimir Piotrovskij RE: metabolite modeling
Dec 17, 1999 Jean Xavier Mazoit metabolite modeling
Dec 17, 1999 Nick Holford Re: metabolite modeling
Dec 17, 1999 Lewis B. Sheiner Re: metabolite modeling