Re: Error in table step

From: Devin Pastoor Date: September 27, 2015 technical Source: mail-archive.com
Mark, Does it work when you omit that individual? If so, I would go through that ID's data records with a fine-toothed comb to make sure their wasn't a 0 floating around somewhere that it shouldn't be thats causing a divide by 0 error or some other data error. The other thing that I might look towards is are you using a log transformation somewhere in your code, possibly a negative number or 0 is entering in somewhere, which can cause this error. Tricky indeed, Devin
Quoted reply history
On Sun, Sep 27, 2015 at 9:54 AM Mark Sale <[email protected]> wrote: > Dear colleagues: > > > I have a very large model (lots of ODEs, lots of data, long duration), > running parallel across several machines, using SAEM. Runs reasonably > well. But, fails the $TABLE with this error: > > 0PROGRAM TERMINATED BY FNLETA > 0PRED EXIT CODE = 1 > 0INDIVIDUAL NO. 3 ID= 5.10000000000000E+01 (WITHIN-INDIVIDUAL) > DATA REC NO. 1 > THETA= > 0.00E+00 1.19E+00 2.59E-01 5.68E+00 2.64E-01 5.69E+00 > 2.35E+00 4.17E-01 4.20E-04 6.50E-01 > 3.98E-01 1.86E-01 -3.50E-01 -2.09E-01 -1.87E+00 2.09E-01 > 1.85E-01 -1.90E-01 1.30E+00 4.82E-01 > 0.00E+00 9.54E-01 1.34E+03 1.19E+00 3.44E-01 1.78E+03 > OCCURS DURING SEARCH FOR ETA AT INITIAL VALUE, ETA=0 > F OR DERIVATIVE RETURNED BY PRED IS INFINITE (INF) OR NOT A NUMBER (NAN). > > 0PROGRAM TERMINATED BY FNLETA > MESSAGE ISSUED FROM TABLE STEP > > All the THETA values of 0.00 are fixed to that value. All the other values > are very reasonable. > > > So, I don't get any tables, can't to a VPC etc. I've tried running FOCE, > no better. Tried error checking that F is always positive, tried EXIT if F > is very small, I have the NOABORT option set (but I don't think that is > relevant in the $TABLE step). > > > I assume it is crashing calculating the conditional ETAs (don't know why > it does OK in estimation). PRDERR only has the small number of error from > the estimation > > > Anyone seen this error, any suggestions on how to get rid of it (other > than removeing subject 51)? > > > Mark > > > > > Mark Sale M.D. > > Vice President, Modeling and Simulation > > Nuventra, Inc. ™ > > 2525 Meridian Parkway, Suite 280 > > Research Triangle Park, NC 27713 > > Office (919)-973-0383 > > [email protected] http://[email protected] > > www.nuventra.com > > > > > > *Empower your Pipeline* > > > > CONFIDENTIALITY NOTICE The information in this transmittal (including > attachments, if any) may be privileged and confidential and is intended > only for the recipient(s) listed above. Any review, use, disclosure, > distribution or copying of this transmittal, in any form, is prohibited > except by or on behalf of the intended recipient(s). If you have received > this transmittal in error, please notify me immediately by reply email and > destroy all copies of the transmittal. > > > > > ------------------------------ > *From:* [email protected] <[email protected]> on > behalf of nonmem <[email protected]> > *Sent:* Wednesday, September 23, 2015 6:47 PM > *To:* Spilker, Mary; [email protected] > *Subject:* RE: [NMusers] PK-PD Modeling position available (Pfizer > Location: La Jolla, CA) > > Dear Mary, l may be over qualified for the position. My current position > is equal to associate director level at Regeneron and my experience exceeds > 2 years significantly. 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Sep 27, 2015 Mark Sale Error in table step
Sep 27, 2015 Brian Sadler RE: Error in table step
Sep 27, 2015 Devin Pastoor Re: Error in table step
Sep 27, 2015 Leonid Gibiansky Re: Error in table step
Sep 28, 2015 Rik Schoemaker RE: Error in table step
Sep 28, 2015 Mark Sale Re: Error in table step