THETA numbering

4 messages 4 people Latest: Oct 04, 2012

THETA numbering

From: Andreas Lindauer Date: October 03, 2012 technical
Dear all, When trying to execute a rather complex control stream with many THETAs, I get the following error message from NMTRAN (see below). I tried to use a different number (e.g. 111) but the error persists. It seems as if NONMEM does not accept 3 digit subscripts? Has anyone had a similar problem? Thanks, Andreas. PS: I'm using NM 7.2. NM-TRAN MESSAGES AN ERROR WAS FOUND IN THE CONTROL STATEMENTS. AN ERROR WAS FOUND ON LINE 169 AT THE APPROXIMATE POSITION NOTED: S13_3 = THETA(100) X 484 SUBSCRIPT MUST BE AN INTEGER CONSTANT. Andreas Lindauer, Ph.D. Associate Principal Scientist, Clinical PKPD Pharmacokinetics, Pharmacodynamics, and Drug Metabolism Merck & Co. / MSD Notice: This e-mail message, together with any attachments, contains information of Merck & Co., Inc. (One Merck Drive, Whitehouse Station, New Jersey, USA 08889), and/or its affiliates Direct contact information for affiliates is available at http://www.merck.com/contact/contacts.html) that may be confidential, proprietary copyrighted and/or legally privileged. It is intended solely for the use of the individual or entity named on this message. If you are not the intended recipient, and have received this message in error, please notify us immediately by reply e-mail and then delete it from your system.

RE: THETA numbering

From: Sam Liao Date: October 03, 2012 technical
Dear Andreas: It is hard to tell from the NONMEM error msg without the list of the control file. My guess of the problem in the control file is the index of theta. The index of theta has to be within the range of the number of theta in your model. If you have 20 theta in your model, the index of theta has to be assigned from 1 to 20. As you may know there is a limit on the number of theta depending on the size specified in NONMEM installation. In NM 7.2, you can add "$SIZE LTH=100" to the beginning of your control file to increase the limit of theta for the model to 100, if your model needs 100 theta. Hope this help. Best regards, Sam Liao PharMax Research Inc. PO Box 15661 Newport Beach, CA 92659 Phone: (201)-988-2043 Fax: (720)-294-6783
Quoted reply history
From: [email protected] [mailto:[email protected]] On Behalf Of Lindauer, A (Andreas) Sent: Wednesday, October 03, 2012 3:07 AM To: [email protected] Subject: [NMusers] THETA numbering Dear all, When trying to execute a rather complex control stream with many THETAs, I get the following error message from NMTRAN (see below). I tried to use a different number (e.g. 111) but the error persists. It seems as if NONMEM does not accept 3 digit subscripts? Has anyone had a similar problem? Thanks, Andreas. PS: I'm using NM 7.2. NM-TRAN MESSAGES AN ERROR WAS FOUND IN THE CONTROL STATEMENTS. AN ERROR WAS FOUND ON LINE 169 AT THE APPROXIMATE POSITION NOTED: S13_3 = THETA(100) X 484 SUBSCRIPT MUST BE AN INTEGER CONSTANT. Andreas Lindauer, Ph.D. Associate Principal Scientist, Clinical PKPD Pharmacokinetics, Pharmacodynamics, and Drug Metabolism Merck & Co. / MSD Notice: This e-mail message, together with any attachments, contains information of Merck & Co., Inc. (One Merck Drive, Whitehouse Station, New Jersey, USA 08889), and/or its affiliates Direct contact information for affiliates is available at http://www.merck.com/contact/contacts.html) that may be confidential, proprietary copyrighted and/or legally privileged. It is intended solely for the use of the individual or entity named on this message. If you are not the intended recipient, and have received this message in error, please notify us immediately by reply e-mail and then delete it from your system.

Re: THETA numbering

From: Ekaterina Gibiansky Date: October 03, 2012 technical
Andreas, It is not the subscript to THETA that is a problem. S is a reserved variable - a scaling parameter in a compartment, which should be written as Si, and i should be an integer denoting the compartment number. You have S13_3 and NONMEM does not know how to interpret 13_3. Regards, Katya -- Ekaterina Gibiansky, Ph.D. CEO&CSO, QuantPharm LLC Web: www.quantpharm.com Email: EGibiansky at quantpharm.com Tel: (301)-717-7032
Quoted reply history
On 10/3/2012 6:06 AM, Lindauer, A (Andreas) wrote: > Dear all, > > When trying to execute a rather complex control stream with many THETAs, I get the following error message from NMTRAN (see below). I tried to use a different number (e.g. 111) but the error persists. It seems as if NONMEM does not accept 3 digit subscripts? Has anyone had a similar problem? > > Thanks, Andreas. > PS: I'm using NM 7.2. > NM-TRAN MESSAGES > AN ERROR WAS FOUND IN THE CONTROL STATEMENTS. > AN ERROR WAS FOUND ON LINE 169 AT THE APPROXIMATE POSITION NOTED: > S13_3 = THETA(100) > X > 484 SUBSCRIPT MUST BE AN INTEGER CONSTANT. > *Andreas Lindauer, Ph.D.* > Associate Principal Scientist, Clinical PKPD > Pharmacokinetics, Pharmacodynamics, and Drug Metabolism > *Merck & Co. / MSD *

RE: THETA numbering

From: Robert Bauer Date: October 04, 2012 technical
Andreas: NMTRAN has a a limit of accepting 2 digits for indexing etas, thetas, or sigmas. This limitation has been removed for nm73, which is presently in beta preparation. Robert J. Bauer, Ph.D. Vice President, Pharmacometrics, R&D ICON Development Solutions 7740 Milestone Parkway Suite 150 Hanover, MD 21076 Tel: (215) 616-6428 Mob: (925) 286-0769 Email: [email protected] Web: http://www.iconplc.com/
Quoted reply history
________________________________ From: [email protected] [mailto:[email protected]] On Behalf Of Lindauer, A (Andreas) Sent: Wednesday, October 03, 2012 6:07 AM To: [email protected] Subject: [NMusers] THETA numbering Dear all, When trying to execute a rather complex control stream with many THETAs, I get the following error message from NMTRAN (see below). I tried to use a different number (e.g. 111) but the error persists. It seems as if NONMEM does not accept 3 digit subscripts? Has anyone had a similar problem? Thanks, Andreas. PS: I'm using NM 7.2. NM-TRAN MESSAGES AN ERROR WAS FOUND IN THE CONTROL STATEMENTS. AN ERROR WAS FOUND ON LINE 169 AT THE APPROXIMATE POSITION NOTED: S13_3 = THETA(100) X 484 SUBSCRIPT MUST BE AN INTEGER CONSTANT. Andreas Lindauer, Ph.D. Associate Principal Scientist, Clinical PKPD Pharmacokinetics, Pharmacodynamics, and Drug Metabolism Merck & Co. / MSD Notice: This e-mail message, together with any attachments, contains information of Merck & Co., Inc. (One Merck Drive, Whitehouse Station, New Jersey, USA 08889), and/or its affiliates Direct contact information for affiliates is available at http://www.merck.com/contact/contacts.html) that may be confidential, proprietary copyrighted and/or legally privileged. It is intended solely for the use of the individual or entity named on this message. If you are not the intended recipient, and have received this message in error, please notify us immediately by reply e-mail and then delete it from your system.