SETUP72 on linux system -- why does gfortran give these compile errors?

2 messages 2 people Latest: Aug 23, 2011

SETUP72 on linux system -- why does gfortran give these compile errors?

From: Nick Holford Date: August 23, 2011 technical
Hi, I'm trying to install NONMEM 7.2.0 on a Linux system. The install seems to go OK (files copied and unzipped) but the gfortran compiler has a list of errors in finishmsgs.txt as shown below. Unzipmsgs.txt and compilemsgs.txt have nothing useful in them. gfortran --v returns this: Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20080704 (Red Hat 4.1.2-48) Does anyone have a suggestion what might be wrong? Best wishes, Nick ======= finishmsgs.txt starts here ======= In file g95linux.f:350 FUNCTION GETCHARQQ2() BIND(C) 1 Error: Unexpected junk after function declaration at (1) In file g95linux.f:351 INTEGER :: GETCHARQQ2 1 Error: Symbol 'getcharqq2' at (1) has already been host associated In file g95linux.f:352 END FUNCTION GETCHARQQ2 1 Error: Expecting END INTERFACE statement at (1) In file g95linux.f:356 IGETC=GETCHARQQ2() 1 Error: Function 'getcharqq2' at (1) has no IMPLICIT type In file g95linux.f:401 FUNCTION PEEKCHARQQ2() BIND(C) 1 Error: Unexpected junk after function declaration at (1) In file g95linux.f:402 LOGICAL :: PEEKCHARQQ2 1 Error: Symbol 'peekcharqq2' at (1) has already been host associated In file g95linux.f:403 END FUNCTION PEEKCHARQQ2 1 Error: Expecting END INTERFACE statement at (1) In file g95linux.f:406 PEEKCHARQQ=PEEKCHARQQ2() 1 Error: Can't convert REAL(4) to LOGICAL(4) at (1) /usr/bin/ar: creating nonmem.a nonmem.a has been created nmtran.exe has been created In file xml_compare.f90:2411 GO TO 2 1 In file xml_compare.f90:2418 2 END DO 2 Warning: Obsolete: GOTO at (1) jumps to END of construct at (2) ==== end of finishmsgs.txt ====== -- Nick Holford, Professor Clinical Pharmacology Dept Pharmacology& Clinical Pharmacology University of Auckland,85 Park Rd,Private Bag 92019,Auckland,New Zealand tel:+64(9)923-6730 fax:+64(9)373-7090 mobile:+64(21)46 23 53 email: [email protected] http://www.fmhs.auckland.ac.nz/sms/pharmacology/holford

RE: SETUP72 on linux system -- why does gfortran give these compile errors?

From: Robert Bauer Date: August 23, 2011 technical
Nick: I recommend that you download and install a later version of the gfortran compiler: gcc-trunk-i686.tar.gz available at ftp://nonmem.iconplc.com/Public/nonmem7/compilers/ Robert J. Bauer, Ph.D. Vice President, Pharmacometrics ICON Development Solutions Tel: (215) 616-6428 Mob: (925) 286-0769 Email: [email protected] Web: www.icondevsolutions.com
Quoted reply history
-----Original Message----- From: [email protected] [mailto:[email protected]] On Behalf Of Nick Holford Sent: Tuesday, August 23, 2011 6:40 AM To: nmusers Subject: [NMusers] SETUP72 on linux system -- why does gfortran give these compile errors? Hi, I'm trying to install NONMEM 7.2.0 on a Linux system. The install seems to go OK (files copied and unzipped) but the gfortran compiler has a list of errors in finishmsgs.txt as shown below. Unzipmsgs.txt and compilemsgs.txt have nothing useful in them. gfortran --v returns this: Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20080704 (Red Hat 4.1.2-48) Does anyone have a suggestion what might be wrong? Best wishes, Nick ======= finishmsgs.txt starts here ======= In file g95linux.f:350 FUNCTION GETCHARQQ2() BIND(C) 1 Error: Unexpected junk after function declaration at (1) In file g95linux.f:351 INTEGER :: GETCHARQQ2 1 Error: Symbol 'getcharqq2' at (1) has already been host associated In file g95linux.f:352 END FUNCTION GETCHARQQ2 1 Error: Expecting END INTERFACE statement at (1) In file g95linux.f:356 IGETC=GETCHARQQ2() 1 Error: Function 'getcharqq2' at (1) has no IMPLICIT type In file g95linux.f:401 FUNCTION PEEKCHARQQ2() BIND(C) 1 Error: Unexpected junk after function declaration at (1) In file g95linux.f:402 LOGICAL :: PEEKCHARQQ2 1 Error: Symbol 'peekcharqq2' at (1) has already been host associated In file g95linux.f:403 END FUNCTION PEEKCHARQQ2 1 Error: Expecting END INTERFACE statement at (1) In file g95linux.f:406 PEEKCHARQQ=PEEKCHARQQ2() 1 Error: Can't convert REAL(4) to LOGICAL(4) at (1) /usr/bin/ar: creating nonmem.a nonmem.a has been created nmtran.exe has been created In file xml_compare.f90:2411 GO TO 2 1 In file xml_compare.f90:2418 2 END DO 2 Warning: Obsolete: GOTO at (1) jumps to END of construct at (2) ==== end of finishmsgs.txt ====== -- Nick Holford, Professor Clinical Pharmacology Dept Pharmacology& Clinical Pharmacology University of Auckland,85 Park Rd,Private Bag 92019,Auckland,New Zealand tel:+64(9)923-6730 fax:+64(9)373-7090 mobile:+64(21)46 23 53 email: [email protected] http://www.fmhs.auckland.ac.nz/sms/pharmacology/holford