Dear All,
I have a large dataset and trying to use parallelization using default mpi
option in NONMEM 7.3. The current mpiwini8.pnm is working fine but I want to
increase number of -nodes (PSN) to 20 to be more efficient. My understanding is
that the current pnm file has upper limit for 8 nodes. Could you please help me
on how to increase the nodes by modifying pnm file or any other option? I
appreciate your help.
Regards,
Ayyappa
Sent from my iPhone
Parallel nonmem
mpiwini8.pnm can handle any number of nodes (cores) as long as they are on a
single computer. Its default setting is 8 nodes, but you can specify
[nodes]=20 on the command line to over-ride this. Or, modify the [nodes]= line
in the pnm file under the $DEFAULTS section.
Robert J. Bauer, Ph.D.
Pharmacometrics R&D
ICON Early Phase
820 W. Diamond Avenue
Suite 100
Gaithersburg, MD 20878
Office: (215) 616-6428
Mobile: (925) 286-0769
[email protected]
www.iconplc.com
Quoted reply history
-----Original Message-----
From: [email protected] [mailto:[email protected]] On
Behalf Of Ayyappa Chaturvedula
Sent: Wednesday, March 08, 2017 2:58 PM
To: [email protected]
Subject: [NMusers] Parallel nonmem
Dear All,
I have a large dataset and trying to use parallelization using default mpi
option in NONMEM 7.3. The current mpiwini8.pnm is working fine but I want to
increase number of -nodes (PSN) to 20 to be more efficient. My understanding is
that the current pnm file has upper limit for 8 nodes. Could you please help me
on how to increase the nodes by modifying pnm file or any other option? I
appreciate your help.
Regards,
Ayyappa
Sent from my iPhone