dos() function in s-plus to call NONMEM using the bootstrappeddata

2 messages 2 people Latest: Apr 25, 2007

RE: dos() function in s-plus to call NONMEM using the bootstrappeddata

From: Pankaj Gupta Date: April 24, 2007 technical
Zheng, Try the following: Choose a folder for your S Plus project. You can specify the name of this folder at the start of an S Plus session. Your control stream and data set should be present in this very folder. It will also now contain the .Data and .Prefs subfolders created by S Plus. Now when you open the S Plus project in this folder you can call NONMEM as dos(paste("nm5 model.txt output.out"),multi=F,output=F) Hope this helps. Regards, Pankaj Gupta Postdoctoral Fellow Clinical Pharmacology Pfizer Inc. 2800 Plymouth Road Ann Arbor, MI 48105
Quoted reply history
-----Original Message----- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Zheng Lu Sent: Tuesday, April 24, 2007 5:20 PM To: nmusers Subject: [NMusers] dos() function in s-plus to call NONMEM using the bootstrappeddata Dear All: Could someone tell how to use dos() in S-plus to run NONMEM for Bootstrapped Data. In my computer, NONMEM can be run in standard DOS window, my basic question is how to specify the path of .ctl file and .lst file, when I write dos('nmfe6 amiwr.ctl amiwr.lst')in s-plus, the message of no amiwr.ctl found was returned, even amiwr.ctl is already under c:\, thank you very much for your consideration and help. Zheng ---------------------------------------------------------------------- LEGAL NOTICE Unless expressly stated otherwise, this message is confidential and may be privileged. It is intended for the addressee(s) only. Access to this E-mail by anyone else is unauthorized. If you are not an addressee, any disclosure or copying of the contents of this E-mail or any action taken (or not taken) in reliance on it is unauthorized and may be unlawful. If you are not an addressee, please inform the sender immediately.

RE: dos() function in s-plus to call NONMEM using the bootstrappeddata

From: Malaz Abutarif Date: April 25, 2007 technical
Lu, You can Copy nmfe5.bat to the project SPLUS project folder. This is a good practice, I copy the nmfe5.bat, the control stream and data files into a project folder. I use that folder as my SPLUS folder. This way, you can run your NonMem using the dos() command in SPLUS without having to specify a folder, and you'll have all input and output files in one place. Malaz Malaz A. AbuTarif, B.Sc. (Pharmacy), Ph.D., G.C.P.M., M.B.A. Principal Scientist, Schering- Plough Research Institute 2015 Galloping Hill Rd, K-15-2-2650 Kenilworth, NJ 07033 Tel: (908) 740-3835, Fax: (908) 740-2916 [EMAIL PROTECTED]
Quoted reply history
-----Original Message----- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Zheng Lu Sent: Tuesday, April 24, 2007 5:20 PM To: nmusers Subject: [NMusers] dos() function in s-plus to call NONMEM using the bootstrappeddata Dear All: Could someone tell how to use dos() in S-plus to run NONMEM for Bootstrapped Data. In my computer, NONMEM can be run in standard DOS window, my basic question is how to specify the path of .ctl file and .lst file, when I write dos('nmfe6 amiwr.ctl amiwr.lst')in s-plus, the message of no amiwr.ctl found was returned, even amiwr.ctl is already under c:\, thank you very much for your consideration and help. Zheng ********************************************************************* This message and any attachments are solely for the intended recipient. If you are not the intended recipient, disclosure, copying, use or distribution of the information included in this message is prohibited -- Please immediately and permanently delete.