Re: Problem with initial values of the omega matrix with nonmem 7.6
Hi
Out of curiosity, how do you submit your NONMEM jobs (eg, which command)?
Sebastien
Regeneron - Internal
Quoted reply history
________________________________
From: [email protected] <[email protected]> on behalf of
Sebastiaan Sassen <[email protected]>
Sent: Wednesday, March 18, 2026 5:57 AM
To: [email protected] <[email protected]>
Subject: [External] [NMusers] Problem with initial values of the omega matrix
with nonmem 7.6
Dear colleagues, I ran into a problem with the omega matrix in nonmem 7. 6 for
a model I received (simple FOCE+I advan3 trans4 nothing special). In the model
file it is specified like this (I tried different notations as simple decimals,
scientific
Dear colleagues,
I ran into a problem with the omega matrix in nonmem 7.6 for a model I received
(simple FOCE+I advan3 trans4 nothing special).
In the model file it is specified like this (I tried different notations as
simple decimals, scientific notation etc. to no avail):
$OMEGA BLOCK(3)
0.107 ; CL
0.48E-1 0.11 ; V1
0.42E-1 0.56E-1 0.084 ; V2
However, with nonmem 7.6 I get a problem with the initial estimates of omega.
If I look at the list file I see that it is due to my omega block, which makes
sense as the correlations between these values used as initial values of etas
are not valid (outside of -1,1). However, these initial estimates are not the
ones I provided. Compare this to the same exact model ran on nonmem 7.4.4. Here
the initial omega estimates are as described in the model and it runs well.
Even in a clean folder without any files other than the dataset (csv) and the
model file (mod).
Am I doing something wrong or is this something else?
Nonmem 7.6:
INITIAL ESTIMATE OF OMEGA HAS A NONZERO BLOCK WHICH IS NUMERICALLY NOT POSITIVE
DEFINITE
0INITIAL ESTIMATE OF OMEGA:
BLOCK SET NO. BLOCK
FIXED
1
NO
0.1000E+01
0.4000E+01 0.1000E+01
0.4000E+01 0.5000E+01 0.8000E+01
Compared to nonmem 7.4.4, which seems to do this correctly:
0INITIAL ESTIMATE OF OMEGA:
BLOCK SET NO. BLOCK
FIXED
1
NO
0.1070E+00
0.4800E-01 0.1100E+00
0.4200E-01 0.5600E-01 0.8400E-01
Best regards,
Sebastiaan
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