Extreme values of CWRESI in NONMEM 7.4.1?
Dear all,
I am reporting about a suspicious behaviour I am observing with CWRESI in
NONMEM 7.4.1.
I have a patent/metabolite model which fits the data decently in terms of VPCs
and other diagnostics, but the CWRESI have some EXTREME values (e.g. some are
less than -15 and more than +40). After checking for outliers or mistakes in
the dataset and finding no obvious reason for this, I realised something funny
was happening.
For all those patients with extreme CWRESI values, all the CWRESI were exactly
the same as WRES. I noticed that this happened for other subjects as well,
without extreme values. In fact it was observed in a number of consecutive
patients in the dataset, then the CWRESI and WRES were different once again for
a number of IDs, then different again.
I pasted below the beginning of my output table (I hope it won't get horribly
mangled in the email). You can see for ID 1002 things are fine, but for the
next subject, all CWRESI and WRES are 100% the same, which I find very odd.
Going on in the table, one then encounters the crazy values (e.g. +40) in those
patients where CWRESI=WRES.
After thinking that I had messed up something in the code (although I have a
fairly standard $ERR chunk), I reran the same models with NM 7.3 and no extreme
CWRESI were to be seen and in no patient CWRESI=WRES. I tried ifortran and
gfortran, same results.
Not sure if this is a bug or something has changed in the implementation of
CWRESI in the new version? Anything that needs to be added into the code? Did
anyone else experience something similar?
Thanks for sharing your experience,
Paolo
ID TIME Y DV PRED
WRES IPRED IWRES CWRESI
1002 0 1.11E-07 0 1.11E-07 0 1.11E-07
-3.9E-06 0
1002 24 0.003244 0 0.000414 0 0.003244
-0.11491 0
1002 47.17 0.004529 0.0234 0.000633 0.80448 0.004529
0.66837 0.7499
1002 47.17 0.001072 0.00782 8.13E-05 0.57553 0.001072
0.8618 0.76168
1002 47.27 0.004351 0 0.000601 0 0.004351
-0.15409 0
1002 47.27 0.004351 0 0.000601 0 0.004351
-0.15409 0
1002 48.27 0.94518 0.967 4.5118 -0.95261 0.94518 0.10129 -1.1938
1002 48.27 0.077732 0.0657 0.33279 0.53181 0.077732
-0.40398 0.55325
1002 49.27 2.7804 2.58 6.0306 -0.4145 2.7804 -0.3187 -0.798
1002 49.27 0.35996 0.339 0.65388 0.57726 0.35996 -0.15724 0.86232
1002 51.25 3.1544 3.09 3.9118 0.63922 3.1544 -0.09023 -0.068
1002 51.25 0.67321 0.814 0.64312 1.0183 0.67321 0.56538 1.0395
1002 53.25 2.2343 2.48 2.0147 1.1994 2.2343 0.48601 0.69346
1002 53.25 0.61916 0.821 0.37813 1.2318 0.61916 0.88123 0.60795
1002 55.23 1.3392 1.56 0.91675 1.0769 1.3392 0.72666 0.70831
1002 55.23 0.41051 0.485 0.16968 1.1534 0.41051 0.49014 -0.11759
1003 0 1.17E-07 0 1.17E-07 0 1.17E-07
-4.1E-06 0
1003 23.92 2.19E-05 0 0.000106 0 2.19E-05
-0.00078 0
1003 46.58 4.65E-05 0.0234 0.000208 0.82167 4.65E-05
0.82766 0.82167
1003 46.58 8.66E-06 0.00782 2.55E-05 0.56411 8.66E-06
0.99888 0.56411
1003 46.63 4.52E-05 0 0.000202 0 4.52E-05
-0.0016 0
1003 46.63 4.52E-05 0 0.000202 0 4.52E-05
-0.0016 0
1003 47.68 1.1432 1.09 5.096 -0.99314 1.1432 -0.20478
-0.99314
1003 47.68 0.065831 0.053 0.39584 0.43182 0.065831
-0.50191 0.43182
1003 48.67 5.38 6.44 6.427 0.93526 5.38 0.87171 0.93526
1003 48.67 0.57361 0.907 0.7257 0.60985 0.57361 1.571 0.60985
1003 50.65 3.6587 3.71 4.0526 -0.30631 3.6587 0.061999
-0.30631
1003 50.65 0.65408 0.662 0.68469 -0.03219 0.65408 0.032746
-0.03219
1003 52.65 1.5856 1.82 2.0167 -0.16771 1.5856 0.65208 -0.16771
1003 52.65 0.33653 0.402 0.38292 0.080183 0.33653 0.5252 0.080183
1003 54.65 0.58013 0.594 0.86702 -0.41124 0.58013 0.10342 -0.41124
1003 54.65 0.12566 0.12 0.16026 -0.07836 0.12566 -0.12016
-0.07836
1004 0 1.69E-07 0 1.69E-07 0 1.69E-07
-6E-06 0
1004 23.83 0.000114 0 0.000285 0 0.000114
-0.00404 0
1004 46.33 0.000242 0.0234 0.000576 0.8068 0.000242
0.82074 0.8068
1004 46.33 3.76E-05 0.00782 7.31E-05 0.57412 3.76E-05
0.99518 0.57412
1004 46.4 0.000233 0 0.000555 0 0.000233
-0.00824 0
1004 46.4 0.000233 0 0.000555 0 0.000233
-0.00824 0
1004 47.38 4.3404 4.59 3.1408 0.54238 4.3404 0.25445 0.54238
1004 47.38 0.34788 0.295 0.20459 -0.38164 0.34788 -0.41035
-0.38164
1004 48.38 5.5978 5.57 4.1733 0.22522 5.5978 -0.02199 0.22522
1004 48.38 0.69068 0.669 0.4033 0.58087 0.69068 -0.08485 0.58087
1004 50.38 3.1389 3.62 2.4749 0.42327 3.1389 0.67784 0.42327
1004 50.38 0.59966 0.721 0.3565 0.7287 0.59966 0.54698 0.7287
1004 52.38 1.4082 1.55 1.1339 -0.29857 1.4082 0.44389 -0.29857
1004 52.38 0.30079 0.434 0.18172 1.7245 0.30079 1.1949 1.7245
1004 54.37 0.54719 0.555 0.45719 -0.3361 0.54719 0.061603 -0.3361
1004 54.37 0.11383 0.114 0.071932 0.039771 0.11383
0.003873 0.039771
--
------------------------------------------------
Paolo Denti, PhD
Pharmacometrics Group
Division of Clinical Pharmacology
Department of Medicine
University of Cape Town
K45 Old Main Building
Groote Schuur Hospital
Observatory, Cape Town
7925 South Africa
phone: +27 21 404 7719
fax: +27 21 448 1989
email: [email protected]<mailto:[email protected]>
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