RE: VD as a fraction of another VD

From: Matt Hutmacher Date: May 24, 2012 technical Source: mail-archive.com
Dear all, >From this thread, I wanted tangentially to broach some issues/thoughts with covariate analysis, and to a lesser extent, initial OMEGA matrix formulation when dealing with parent-metabolite models. For simplicity, assume only one metabolite, IV injection of parent with clearance and clearance to metabolite of CLo and CLm, respectively, (total parent clearance is CLt=Clo+Clm) and one compartment disposition models. Then let k = CLt/Vp and Vp (Vm) is the volume of the parent (metabolite). The model is well known: Cm = Dose*k12/Vm*(exp(-k*t)-exp(k20)*t)/(k20-k) [k20 is metabolite elimination rate constant], but to focus the discussion use Cm = Dose*k12/Vm*A(t) to simplify, since we will not need A(t) . Since metabolite is not dosed, as discussed, we have an identifiability issue. The model can be rewritten as discussed, Cm = Dose*Fm/Vm*k*A(t) where Fm = k12/k = Clm/(Clo+Clm) because k12 = Clm/Vp. An estimable form of this model is Cm = Dose/Vm0*k*A(t) where Vm0 = Vm/Fm, ie, the fraction metabolized is absorbed into the volume It would seem to me that covariates assumed to have the relationship (Clm+Clo)*f(x) [f(x) is the covariate function for x] are not necessarily required to be tested on Vm0 (the parameter we can estimate) because it would cancel. For example, if f(x) = (WT/70)^x, then it is not a component of Vm0 because of Clm/(Clo+Clm) and its cancelation. However, if a covariate affects only one of Clm or Clo, or effects these in a different way (or to a different extent), then one should evaluate this covariate on either Vm0, or using a relative version of Fm, eg, Fm = 1 * f(x), (ideally based on the interpretation the analyst wants to imply), because the relationship will be implicit and not cancel. Carrying this to random effects, if one is to fit a model to the parent with CLt*exp(etaCLt) then this would not induce an implicit correlation with Vm0 (as above). If there is variability in the fraction metabolized between subjects, then even if CLt*exp(etaCLt) is used for modeling the parent, the eta in Vm0*exp(etaVm0) should be evaluated for correlation with etaCLt, because of the underlying variablity in Clo and Clm. Additionally, it would seem that becuase Vp factors out of Fm, covariates influencing Vp would not necessarily need to be tested (from an implicit viewpoint) on Vm0, and a priori correlation between Vm0 and Vp need not be applied as there is not underlying implicit relationship induced by the inclusion of Fm into Vm0, but that correlation could still be evaluated. Best regards, Matt
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From: [email protected] [mailto:[email protected]] On Behalf Of Martin Bergstrand Sent: Wednesday, May 23, 2012 1:56 PM To: 'Nick Holford'; 'e.krekels'; 'Carlos Orlando Jacobo Cabral'; 'nonmem users' Subject: RE: [NMusers] VD as a fraction of another VD Dear Elke, Orlando and Nick, I have to give Nick my full hearted support in this question. Parent drug/metabolite models are common practice in population PK and there should be a kind of best practice for how to parameterize these instead of inventing one new way after another. I do not doubt that the Knibbe model gives an excellent fit to that data and is predictive with respect to external data. That is not the point, the point is that an identical fit to the data could have been obtained by another parameterization that makes for a much more straight forward interpretation. The volume of distribution for the metabolite (e.g. M3G) is unidentifiable in the exact same way that the volume of distribution is unidentifiable for any drug where only data following oral administration is available. The estimate of both Volume and CL for the metabolites will be estimates over Fmet (i.e. the fraction of the parent compound that forms the metabolite). To estimate V2 as a fraction of V1 is a pointless parameterization that serves no purpose. It is reasonable to believe that there will be a high correlation between the volumes of distribution (e.g. V1 and V2) and this can be assessed by applying an OMEGA BLOCK to estimate the covariance (e.g. OMEGA1 and OMEGA2, see below). V1 = THETA(1)*EXP(ETA(1)) ; central volume for morphine V2 = THETA(2)*EXP(ETA(2)) ; central volume for M3G/Fm3g $OMEGA BLOCK(2) 0.1 ; VAR_V1 0.08 ; COVAR_V1_V2 0.1 ; VAR_V2 The outcome of this could be that the estimated covariance corresponds to approximately 100% correlation. In this case it is still not clearly justified to reduce the model to assume the same OMEGA variance for both parameters since the magnitude of variability could still differ between the two parameters. To assume 100% correlation but different variances can be done with this parameterization: V1 = THETA(1)*EXP(ETA(1)) ; central volume for morphine V2 = THETA(2)*EXP(ETA(1)*THETA(3)) ; central volume for M3G/Fm3g Where THETA(4) relates the standard deviation of V2 to the standard deviation of V1 random effect. This model is hierarchically related to a parameterization that is mathematically equivalent to the parameterization in the Kibbe model: V1 = THETA(1)*EXP(ETA(1)) ; central volume for morphine V2 = THETA(2)*EXP(ETA(1)) ; central volume for M3G/Fm3g This parameterization could very well turn out to be a sufficient characterization of the system but it is not true that it cannot be tested if a more complex model is better (see above steps). When it comes to the fraction of morphine that is metabolized into M3G and M6G it can as pointed out not be estimated without access to data following iv. administration of the metabolites or making very strong assumption such as fixing distribution volumes etc. Instead it is better to in the model have all morphine that is eliminated forms both M3G and M6G. This way the estimated clearance parameters for the metabolites will be (CLm3g/Fm3g and CLm6g/Fm6g). By the same logic that it isn't identifiable to quantify the relative formation of M3G and M6G it is also impossible to characterize any additional rout of elimination. Reducing the model by setting similar volumes of distribution to the one and same parameter is nothing that I would practice and I think that it is more transparent to show the certainty estimates for each parameter in the model. Let me again stress that I do not question the predictive performance of the Knibbe model or that it has been useful for it's purposes. I have no insight to this . However I don't think that it has applied a type of parameterization that should be put forward as a good example since it has no advantages compared to the standard parameterization that I suggest that does facilitate a straight forward interpretation and easy comparison to results from other studies (with or without data following iv administration of M3G/M6G). Regards, Martin Bergstrand, PhD Pharmacometrics Research Group Dept of Pharmaceutical Biosciences Uppsala University Sweden [email protected] Visiting scientist: Mahidol-Oxford Tropical Medicine Research Unit, Bangkok, Thailand Phone: +66 8 9796 7611
May 21, 2012 Carlos Orlando Jacobo Cabral VD as a fraction of another VD
May 21, 2012 Bill Denney RE: VD as a fraction of another VD
May 21, 2012 Nick Holford Re: VD as a fraction of another VD
May 22, 2012 Carlos Orlando Jacobo Cabral RE: VD as a fraction of another VD
May 22, 2012 Nick Holford Re: VD as a fraction of another VD
May 23, 2012 Elke Krekels RE: VD as a fraction of another VD
May 23, 2012 Carlos Orlando Jacobo Cabral RE: VD as a fraction of another VD
May 23, 2012 Martin Bergstrand RE: VD as a fraction of another VD
May 24, 2012 Joseph Standing RE: VD as a fraction of another VD
May 24, 2012 Matt Hutmacher RE: VD as a fraction of another VD