Simple parallel benchmark for Nonmem 7.2 with large Bayes problem
Here some quick-and-dirty results of my first benchmark with parallel
processing in NONMEM 7.2
Running Win7, 64 bit, intel i7, with 4 CPU (and 4 hyperthreading cores). One
computer only.
Using file message passing. Could not get mpi to work in this configuration.
call nmfe72 mtl_KPreM2Pre_T2L2_.ctl -parafile=fpiwini8.pnm [nodes]= (1 or 4
or 8)
10 iterations of a very large Bayes problem (which should not profit from
multiple cores, according to the manual)
nodes time
1 45 s
4 25 s
8 40 s
So about a factor of 2 between 1 and 4 cores.
It is not surprising that 8 gives worse values because these are no real
CPUs. More surprising is the fact that with 8 "CPU", I have 100 load on all
of them (huh?), while with 4 CPUs, I have the expected 50%.
Dieter