RE: Simultaneous PK and Cell Life Span PD modeling
Toufigh, When I first started this some very smart people told me that you should put an ETA on everything, because, biologically, there is variability on everything. Since, then, I've decided that this isn't a feasible approach. The same argument would be used to justify physiologically based pk models - even though they have two many parameters to be feasible. At the other end, if you talk to some very traditional statistician, they are entirely "data driven", don't put anything in that the data don't tell you to, i.e., ignore your knowledge of biology entirely. So, we all decide where we are on this empirical/theoretical spectrum. Personally, I like to think I'm somewhere in the middle - biologically based, but really need the data to tell me what should go into a model. The good news, I think, is that Bayesian statistics lets us do this. Could be done formally, but you'd have to specify, up front, how confident yo!
u were that each feature is in the model. If you have lots of reason to believe that volume is a linear function of weight, then (IMHO) you are justified putting it in even if the current data in hand don't really tell you that. On the other hand, I'd be hesitant to put clearance as a function of astrological sign, even if the current data support that (unless the support is very, very strong) - because my prior is so low. People more knowledgeable about Bayesian methods could put this in a more formal structure. But, to your question, my answer is NO, you might start with a prior that there is an ETA on any given parameter, but if the current data don't support it (by which I mean either in terms of log-likelihood test [I know, you can't formally test whether and ETA is significant] or failure to converge) I don't hesitate to remove it. I don't see a reason to treat variance parameters any different from structural model parameters or co!
variate parameters in this regard.Mark
Mark Sale MD Next Level Solutions, LLC
www.NextLevelSolns.com
Quoted reply history
-------- Original Message --------
Subject: RE: [NMusers] Simultaneous PK and Cell Life Span PD modeling
From: "Toufigh Gordi" <[EMAIL PROTECTED]>
Date: Thu, July 19, 2007 12:22 pm
To: <[email protected]>
Hi,Then let me ask the readers about their experience with estimating ETAson every single structural model parameter. I have seen many examples ofNM control streams, where in addition to a complex structural model alsoseveral variability terms are implemented. In my limited experience, itis rather unlikely to be able to get meaningful estimates of all theseparameters based on measurements of a single compartment in the model. It would be interesting to hear other people's comments.Toufigh-----Original Message-----From: owner-nmusers@globomaxnm.com [mailto:owner-nmusers@globomaxnm.com]On Behalf Of Wei-Jian PanSent: Wednesday, July 18, 2007 10:52 AMTo: Mark Sale - Next Level SolutionsCc: nmusers@globomaxnm.com
Subject: RE: [NMusers] Simultaneous PK and Cell Life Span PD modeling
Mark:
Thanks for your suggestions! I have removed "DEFOBS"
from CMT6, and it is now running.
Toufigh:
Yes, I do have dense PK and PD data for this modeling
exercise. I presented the simultaneous PK/PD modeling
results at last month's AAPS NBC as a poster. I am now
attempting to use the cell life span model to see if
there any improvements in model fitting. Note that
this is an mAb which reduces the NK cell count in the
peripheral blood.
Thanks!
Wei-jian
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