4Comp.mod.
From: "Ralph Quadflieg" <quadflieg@uni-bonn.de>
Subject: 4Comp.mod.
Date: 28 Sep 1998 14:16:27 -0400
Dear NONMEM users,
I am a new NONMEM user and I have some difficulties in writing a control file for my pk problem:
I would like to model 3 data sets (3 different settings) with a 4 compartment model (depot, central, peripher1, peripher2).
a) the depot comp. should be the dosing compartment with a first order process to the central comp. (is not known) a bioavailability factor (is not known, oral appl.) and a lagtime parameter (is not known)
b) the central comp. should be the dosing comp. with two different constant rates (are known) and a bioavailability factor = 1 (iv infusion)
I thought that this should be a problem for ADVAN6 and TRANS1 with a MODEL record like this:
MODEL
NCOMPARTMENTS = 4
COMP = (DEPOT)
COMP = (CENTRAL, DEFOBS)
COMP = (PER1)
COMP = (PER2)
LINK DEPOT TO CENTRAL = 1
LINK CENTRAL AND PER1 = 3
LINK CENTRAL AND PER2 = 5
LINK CENTRAL TO OUTPUT = 7
PK
KA = THETA(1) * EXP(ETA(1))
V2 = THETA(2) * EXP(ETA(2))
CL23 = THETA(3) * EXP(ETA(3))
V3 = THETA(4) * EXP(ETA(4))
CL24 = THETA(5) * EXP(ETA(5))
V4 = THETA(6) * EXP(ETA(6))
CL20 = THETA(7) * EXP(ETA(7))
F1 = THETA(8) * EXP(ETA(8))
ALAG1 = THETA(9) * EXP(ETA(9))
S1 = V1
k23 = CL23/V2
k32 = CL23/V3
k24 = CL24/V2
k42 = CL24/V4
k20 = CL20/V2
and a corresponding data file with RATE CMT EVID PCMT data items.
But there are problems due to the MODEL block, which I cannot solve (especially the LINK statement).
I am a bit confused about the different possibilities of working with the LINK statements within the MODEL block or within th PK block, I should say.
The MODEL is established with differential equations, but with this control file the run takes a lot of time. (around one hour).
I would be pleased if there was somebody who can help me.
Thank you in advance
Ralph Quadflieg
Dept.Pharm.Techn.Biopharm.
University of Bonn
An der Immenburg 4
D-53121 Bonn
Germany
quadflieg@uni-bonn
http://www.pharma.uni-bonn.de/pharmtech/
Tel.: ++49 228 218997
Fax.:++49 228 735268