Title: Paul R
I have been getting consistent fatal error messages when I have tried
to bring up NONMEM files set up for evaluation with XPOSE. The text of
the error line varies with what I have asked of XPOSE, but the
consistent component is "cur.db not found". XPOSE 3.1 also had
trouble, but more clearly told me that the file with the requested
number was not found.
It turns out that XPOSE at present apparently does not like leading
zeros in the file name. Thus, it was rejecting patab003
but accepting patab3.
Everybody else probably knows this by now. Mats, Andrew, and Justin -
great program. Thanks.
Paul
--
Paul R.
Hutson, Pharm.D.
Associate
Professor
UW School
of Pharmacy
777
Highland Avenue
Madison
WI 53705-2222
Tel 608.263.2496
Fax
608.265.5421
Pager
608.265.7000, p7856
XPOSE4 cur.db error
4 messages
4 people
Latest: May 25, 2007
First of all, let me second Paul's opinion of Xpose4. They have done a
great job with it and we have been able to integrate xpose4 into PDx-Pop
not only on Windows but Linux and Mac OS X as well.
Second, I don't think the issue is the zeros. I just tried it
successfully with 003. It may be a case sensitivity thing and be
looking for capitals? My tables looked like this:
$TABLE ID SID TIME TAD IPRED CL WT APGR NOPRINT ONEHEADER FILE=003.TAB
$TABLE ID CL V NOPRINT ONEHEADER FILE=PATAB003
$TABLE ID WT APGR NOPRINT ONEHEADER FILE=COTAB003
$TABLE ID APGR NOPRINT ONEHEADER FILE=CATAB003
$TABLE ID TIME IPRED IWRES NOPRINT ONEHEADER FILE=SDTAB003
Bill
Quoted reply history
________________________________
From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED]
On Behalf Of Paul Hutson
Sent: Thursday, May 24, 2007 9:33 AM
To: [email protected]
Subject: [NMusers] XPOSE4 cur.db error
I have been getting consistent fatal error messages when I have tried to
bring up NONMEM files set up for evaluation with XPOSE. The text of the
error line varies with what I have asked of XPOSE, but the consistent
component is "cur.db not found". XPOSE 3.1 also had trouble, but more
clearly told me that the file with the requested number was not found.
It turns out that XPOSE at present apparently does not like leading
zeros in the file name. Thus, it was rejecting patab003
but accepting patab3.
Everybody else probably knows this by now. Mats, Andrew, and Justin -
great program. Thanks.
Paul
--
Paul R. Hutson, Pharm.D.
Associate Professor
UW School of Pharmacy
777 Highland Avenue
Madison WI 53705-2222
Tel 608.263.2496
Fax 608.265.5421
Pager 608.265.7000, p7856
_______________________________________________________________________________________________________________________________________
Dear Paul,
Thanks for the praise. I'd just like to point out that Niclas Jonsson is the
main architect around the changes - least credit should go to me.
Best regards,
Mats
Mats Karlsson, PhD
Professor of Pharmacometrics
Div. of Pharmacokinetics and Drug Therapy
Dept. of Pharmaceutical Biosciences
Faculty of Pharmacy
Uppsala University
Box 591
SE-751 24 Uppsala
Sweden
phone +46 18 471 4105
fax +46 18 471 4003
[EMAIL PROTECTED]
_____
Quoted reply history
From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On
Behalf Of Paul Hutson
Sent: Thursday, May 24, 2007 15:33
To: [email protected]
Subject: [NMusers] XPOSE4 cur.db error
I have been getting consistent fatal error messages when I have tried to
bring up NONMEM files set up for evaluation with XPOSE. The text of the
error line varies with what I have asked of XPOSE, but the consistent
component is "cur.db not found". XPOSE 3.1 also had trouble, but more
clearly told me that the file with the requested number was not found.
It turns out that XPOSE at present apparently does not like leading zeros in
the file name. Thus, it was rejecting patab003
but accepting patab3.
Everybody else probably knows this by now. Mats, Andrew, and Justin - great
program. Thanks.
Paul
--
Paul R. Hutson, Pharm.D.
Associate Professor
UW School of Pharmacy
777 Highland Avenue
Madison WI 53705-2222
Tel 608.263.2496
Fax 608.265.5421
Pager 608.265.7000, p7856
Hi Paul,
Thanks for the comments. I was wondering if, when you ask Xpose to read the
files, you ask it to read run number '3' or '003'. I think the later should
work if your files are named 'sdtab003' for example.
-Andy
Andrew Hooker, Ph.D.
Assistant Professor of Pharmacometrics
Div. of Pharmacokinetics and Drug Therapy
Dept. of Pharmaceutical Biosciences
Uppsala University
Box 591
751 24 Uppsala
Sweden
Tel: +46 18 471 4355
www.farmbio.uu.se/research.php?avd=5
_____
From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On
Behalf Of Paul Hutson
Sent: Thursday, May 24, 2007 5:22 PM
Cc: [email protected]
Subject: Re: [NMusers] XPOSE4 cur.db error
XPOSE team: My apologies and thanks to Niclas as well. The shift to R is
welcome.
Bill:
I tried caps vs lower case, since R (and SPlus) can be sensitive to that
unless the source code permits either. I couldn't get it to work with the
003 in either case in either XPOSE31 or 4 (build 5.1).
I was using NOPRINT ONEHEADER as well. Curious that yours is working.
Maybe it has something to do with the humidity.
Paul
Bachman, William (MYD) wrote:
First of all, let me second Paul's opinion of Xpose4. They have done a
great job with it and we have been able to integrate xpose4 into PDx-Pop not
only on Windows but Linux and Mac OS X as well.
Second, I don't think the issue is the zeros. I just tried it successfully
with 003. It may be a case sensitivity thing and be looking for capitals?
My tables looked like this:
$TABLE ID SID TIME TAD IPRED CL WT APGR NOPRINT ONEHEADER FILE=003.TAB
$TABLE ID CL V NOPRINT ONEHEADER FILE=PATAB003
$TABLE ID WT APGR NOPRINT ONEHEADER FILE=COTAB003
$TABLE ID APGR NOPRINT ONEHEADER FILE=CATAB003
$TABLE ID TIME IPRED IWRES NOPRINT ONEHEADER FILE=SDTAB003
Bill
_____
Quoted reply history
From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On
Behalf Of Paul Hutson
Sent: Thursday, May 24, 2007 9:33 AM
To: [email protected]
Subject: [NMusers] XPOSE4 cur.db error
I have been getting consistent fatal error messages when I have tried to
bring up NONMEM files set up for evaluation with XPOSE. The text of the
error line varies with what I have asked of XPOSE, but the consistent
component is "cur.db not found". XPOSE 3.1 also had trouble, but more
clearly told me that the file with the requested number was not found.
It turns out that XPOSE at present apparently does not like leading zeros in
the file name. Thus, it was rejecting patab003
but accepting patab3.
Everybody else probably knows this by now. Mats, Andrew, and Justin - great
program. Thanks.
Paul
--
Paul R. Hutson, Pharm.D.
Associate Professor
UW School of Pharmacy
777 Highland Avenue
Madison WI 53705-2222
Tel 608.263.2496
Fax 608.265.5421
Pager 608.265.7000, p7856
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