Dear All,
I have a problem with my TABLE option. I have the following code:
$ESTIMATION NOABORT POSTHOC METHOD=ZERO INTER MAXEVAL=9999 PRINT=5 MSFO=run1.msf
$COVARIANCE
$EST METHOD=ITS INTERACTION FILE=example1.ext NITER=500 PRINT=5 NOABORT SIGL=4
CTYPE=3 CITER=10 CALPHA=0.05 NOPRIOR=1 NSIG=2
$EST METHOD=IMP MAPITER=0 INTERACTION EONLY=1 NITER=5 ISAMPLE=3000 PRINT=1
SIGL=8 NOPRIOR=1
$EST METHOD=BAYES INTERACTION FILE=example1.txt NBURN=10000 NITER=10000
PRINT=100 NOPRIOR=0
$EST METHOD=COND INTERACTION MAXEVAL=9999 NSIG=3 SIGL=10 PRINT=5 NOABORT
NOPRIOR=1 FILE=example1.ext
$COV MATRIX=R PRINT=E UNCONDITIONAL SIGL=12
$TABLE ID TIME PRED RES WRES CPRED CWRES EPRED ERES EWRES NOAPPEND ONEHEADER
FILE=example1.TAB NOPRINT
$TABLE ID CL V FIRSTONLY NOAPPEND NOPRINT FILE=example1.PAR
$TABLE ID ETA1 ETA2 FIRSTONLY NOAPPEND NOPRINT FILE=example1.ETA
$TABLE ID TIME DV IPRED IWRES NOPRINT ONEHEADER FILE=SDTAB1
$TABLE ID AGE GEN HT WT NOPRINT NOAPPEND ONEHEADER FILE=CATAB1
$TABLE ID GEN NOPRINT NOAPPEND ONEHEADER FILE=COTAB1
$TABLE ID CL V ETA1 ETA2 NOPRINT NOAPPEND ONEHEADER FILE=PATAB1
$TABLE ID TIME DV IPRED AMT MDV CL V ETA1 ETA2 CWRES NOPRINT ONEHEADER
FILE=RUN1.fit
For some reason, my files related XPOSE (CATAB, PATAB etc..) are not created
but others are coming fine. The run was successful with all the estimations
but having trouble with Table files. I appreciate your help to resolve this.
I am using g95 fortran compiler, Windows 7,NONMEM7.2.
Ayyappa Chaturvedula, PhD
Visiting Assistant Research Professor,
College of Pharmacy and Health Sciences,
Mercer University,
3001 Mercer University Drive,
Atlanta, GA 30341
6785476168 (O)
[cid:[email protected]]
<<inline: image001.gif>>
Table files are not created
Read the NONMEM output file (the first thing you should always do) and
look for clues. See if says anything like "problem with table step",
etc.
Quoted reply history
From: [email protected] [mailto:[email protected]]
On Behalf Of Ayyappa Chaturvedula
Sent: Wednesday, September 07, 2011 1:52 PM
To: [email protected]
Subject: [NMusers] Table files are not created
Dear All,
I have a problem with my TABLE option. I have the following code:
$ESTIMATION NOABORT POSTHOC METHOD=ZERO INTER MAXEVAL=9999 PRINT=5
MSFO=run1.msf
$COVARIANCE
$EST METHOD=ITS INTERACTION FILE=example1.ext NITER=500 PRINT=5 NOABORT
SIGL=4 CTYPE=3 CITER=10 CALPHA=0.05 NOPRIOR=1 NSIG=2
$EST METHOD=IMP MAPITER=0 INTERACTION EONLY=1 NITER=5 ISAMPLE=3000
PRINT=1 SIGL=8 NOPRIOR=1
$EST METHOD=BAYES INTERACTION FILE=example1.txt NBURN=10000 NITER=10000
PRINT=100 NOPRIOR=0
$EST METHOD=COND INTERACTION MAXEVAL=9999 NSIG=3 SIGL=10 PRINT=5 NOABORT
NOPRIOR=1 FILE=example1.ext
$COV MATRIX=R PRINT=E UNCONDITIONAL SIGL=12
$TABLE ID TIME PRED RES WRES CPRED CWRES EPRED ERES EWRES NOAPPEND
ONEHEADER FILE=example1.TAB NOPRINT
$TABLE ID CL V FIRSTONLY NOAPPEND NOPRINT FILE=example1.PAR
$TABLE ID ETA1 ETA2 FIRSTONLY NOAPPEND NOPRINT FILE=example1.ETA
$TABLE ID TIME DV IPRED IWRES NOPRINT ONEHEADER FILE=SDTAB1
$TABLE ID AGE GEN HT WT NOPRINT NOAPPEND ONEHEADER FILE=CATAB1
$TABLE ID GEN NOPRINT NOAPPEND ONEHEADER FILE=COTAB1
$TABLE ID CL V ETA1 ETA2 NOPRINT NOAPPEND ONEHEADER FILE=PATAB1
$TABLE ID TIME DV IPRED AMT MDV CL V ETA1 ETA2 CWRES NOPRINT ONEHEADER
FILE=RUN1.fit
For some reason, my files related XPOSE (CATAB, PATAB etc..) are not
created but others are coming fine. The run was successful with all the
estimations but having trouble with Table files. I appreciate your help
to resolve this. I am using g95 fortran compiler, Windows 7,NONMEM7.2.
Ayyappa Chaturvedula, PhD
Visiting Assistant Research Professor,
College of Pharmacy and Health Sciences,
Mercer University,
3001 Mercer University Drive,
Atlanta, GA 30341
6785476168 (O)