redhat linux for nonmem

From: Sam Liao [mailto:sliao@pharmaxresearch.com] Subject: [NMusers] redhat linux for nonmem Date: Thursday, May 02, 2002 2002 2:56 Hi Niclas: I saw some previous e-mail msg that your are an experienced user of redhat linux for nonmem. I tried redhat linux, I have some problem to use setup for nonmem installation. I got a syntax error on line 13 near 'goto'. Could you please tell me what might be wrong? I used 'sh setup' to run the script file. Before setup, I used the 'dos2unix *' conversion to unix format for all the nonmem files. Thanks alot in advance. Best regards, Sam Liao, Ph.D. PharMax Research 270 Kerry Lane, Blue Bell, PA 19422 phone: 215-6541151 efax: 1-720-2946783

From: Sam Liao [mailto:sliao@pharmaxresearch.com] Subject: [NMusers] RE: redhat linux for nonmem Date: Thursday, May 02, 2002 6:13 To: Niclas Jonsson Cc: Bachman, William Dear Niclas: Thanks a lot for your tip on redhat linus. It works! After installation, I tried CONTROL3, CONTROL5 AND CONTROL7. They all terminated after the 0 iteration. This may have something to do with the setup options. I just used the default options. Any tips on redhat linux would be appreciated. There is no tips archived on GLOBOMAX website. I cc this e-mail to Bill, it may be helpful to alot other nonmem users to have tips on nonmem installation for redhat Linux. Best regards, Sam Liao, Ph.D. PharMax Research 270 Kerry Lane, Blue Bell, PA 19422 phone: 215-6541151 efax: 1-720-2946783

From: Niclas Jonsson [mailto:niclas.jonsson@farmbio.uu.se] Subject: [NMusers] [NMusers] RE: redhat linux for nonmem Date: Thursday, May 02, 2002 9:42 AM Dear Sam, Maybe you should say /bin/csh setup instead of sh. (The code in setup is c-shell and not bourne-shell.) If that doesnt help I suggest you contact Globomax. They should be able to help you. Best, Niclas

From: Niclas Jonsson [mailto:niclas.jonsson@farmbio.uu.se] Subject: [NMusers] RE: redhat linux for nonmem Date: Thursday, May 02, 2002 3:26 PM If you took the sources from the PC distribution of NONMEM then youll also have to change the BEGIN.f sub-routine. I think the right code is in it. Best, Niclas

From: Sam Liao [mailto:sliao@pharmaxresearch.com] Subject: [NMusers] RE: redhat linux for nonmem Date: Thursday, May 02, 2002 4:59 PM Hi Niclas: Setup script put 'C' to comment out two lines in BEGIN.f, I replace the new one with the original one and re-compile everything again. However, I still got the same results. There is a error msg at the end of the run- 'Segmentation fault', the nonmem run stop after 0 iteration output. Best regards, Sam Liao, Ph.D. PharMax Research 270 Kerry Lane, Blue Bell, PA 19422 phone: 215-6541151 efax: 1-720-2946783

From: Bachman, William [mailto:bachmanw@globomax.com] Subject: [NMusers] RE: redhat linux for nonmem Date: Monday, May 06, 2002 4:23 PM Sam, I was able successfully installed NONMEM V on Redhat 7.2 with the following arguments" SETUP /opt/NONMEM/nmv f77 ' -O3 -malign-double ' /usr/bin/ar Intel Bill nmconsult@globomaxnm.com GloboMax LLC 7250 Parkway Drive, Suite 430 Hanover, MD 21076 Voice: (410) 782-2205 FAX: (410) 712-0737

From: "Sam Liao" Subject: [NMusers] [NMusers] RE: redhat linux for nonmem Date: Mon, May 6, 2002 6:32 pm Hi Bill: It works! Thanks alot for your tips. Best regards, Sam Liao, Ph.D. PharMax Research 270 Kerry Lane, Blue Bell, PA 19422 phone: 215-6541151 efax: 1-720-2946783 *******