Dear all,
I have a naive question to ask regarding the output from scm step in PsN.
What does below code means during a scm run?
Starting 21 NONMEM executions. 21 in parallel.
S:1 .. S:3 .. S:5 .. S:7 .. S:9 .. S:11 .. S:13 .. S:15 .. S:17 .. S:19 ..
S:21 .. Waiting for all NONMEM runs to finish:
F:13 .. F:16 .. F:7 .. F:4 .. F:10 .. F:19 .. F:21 .. F:1 .. done
Specifically, S:1 ... ... S:21, F:13......F16, what does these code
represent? Thanks.
Best Regards
--
Xinting
PsN: scm output
Dear Xinting,
The S and F means Start and Finish and the numbers correspond to the nonmem
models in your SCM (or bootstrap, etc). Not every run number is shown to save
some space on the screen. The models may not finish in the same order as they
got started, hence the unordered list of F:13, F:16, etc.
Best regards,
Lars
Quoted reply history
From: [email protected] [mailto:[email protected]] On
Behalf Of Xinting Wang
Sent: den 27 mars 2014 06:11
To: [email protected]
Subject: [NMusers] PsN: scm output
Dear all,
I have a naive question to ask regarding the output from scm step in PsN. What
does below code means during a scm run?
Starting 21 NONMEM executions. 21 in parallel.
S:1 .. S:3 .. S:5 .. S:7 .. S:9 .. S:11 .. S:13 .. S:15 .. S:17 .. S:19 .. S:21
.. Waiting for all NONMEM runs to finish:
F:13 .. F:16 .. F:7 .. F:4 .. F:10 .. F:19 .. F:21 .. F:1 .. done
Specifically, S:1 ... ... S:21, F:13......F16, what does these code represent?
Thanks.
Best Regards
--
Xinting
Dear Xinting,
The 'start' part ends when all NONMEM runs have been started, then the 'finish' begins. This means that many NM runs may have finished long before you see any 'F' numbers. And, as Lars says, not all numbers will be printed on screen.
Best regards,
Kajsa
Quoted reply history
On 03/27/2014 09:24 AM, Xinting Wang wrote:
> Dear all,
>
> Thanks very much for the explanation. That actually helps a lot. However, I have a further question as when does the program thinks the start end, and finish begins? Is it when the first one finishes and then F begins?
>
> On 27 March 2014 15:05, Lars Lindbom < [email protected] < mailto: [email protected] >> wrote:
>
> Dear Xinting,
>
> The S and F means Start and Finish and the numbers correspond to
> the nonmem models in your SCM (or bootstrap, etc). Not every run
> number is shown to save some space on the screen. The models may
> not finish in the same order as they got started, hence the
> unordered list of F:13, F:16, etc.
>
> Best regards,
>
> Lars
>
> *From:*[email protected]
> <mailto:[email protected]>
> [mailto:[email protected]
> <mailto:[email protected]>] *On Behalf Of *Xinting Wang
> *Sent:* den 27 mars 2014 06:11
> *To:* [email protected] <mailto:[email protected]>
> *Subject:* [NMusers] PsN: scm output
>
> Dear all,
>
> I have a naive question to ask regarding the output from scm step
> in PsN. What does below code means during a scm run?
>
> Starting 21 NONMEM executions. 21 in parallel.
> S:1 .. S:3 .. S:5 .. S:7 .. S:9 .. S:11 .. S:13 .. S:15 .. S:17 ..
> S:19 .. S:21 .. Waiting for all NONMEM runs to finish:
> F:13 .. F:16 .. F:7 .. F:4 .. F:10 .. F:19 .. F:21 .. F:1 .. done
>
> Specifically, S:1 ... ... S:21, F:13......F16, what does these
> code represent? Thanks.
>
> Best Regards
>
> --
>
> Xinting
>
> --
> Xinting
--
-----------------------------------------------------------------
Kajsa Harling, PhD
System Developer
Department of Pharmaceutical Biosciences
Uppsala University
[email protected]
+46-(0)18-471 4308
http://www.farmbio.uu.se/research/researchgroups/pharmacometrics/