Hi,
After updating PsN, I run into the following problem when launching a nonmem
model that used to be running. The error message is not specific enough for me
to know how to fix it. Could anybody point me in the right direction?
Software:
PsN 4.4.0 on ActivePerl64 on windows 7 (64bit)
Running 'C:\Perl64\bin\execute mymodel.mod' gives the following error message:
"File system problem or NMtran could not be initiated (the NMtran output file
FDATA is missing). There is no lst-file for the model in NM_run1. It is
recommended to check the perl installation, and perl settings in psn.conf."
Here is the beginning of the psn.conf:
output_style = SPLUS
perl = C:\Perl64\bin\perl.exe
R = C:\Program Files\R\R-3.1.1\bin\R.exe
use_keyboard=0
use_database=0
job_polling_interval=1
polls_per_moshog_request=5
[nm_versions]
default=C:\nm73g64\run\nonmem.exe,7.3
73=C:\nm73g64\run\nonmem.exe,7.3
[default_options]
; Options valid for all tools
threads=5
nmfe=1
nm_output=phi,ext
nmfe_options=prdefault,xmloff
[...]
Any help with this would be much appreciated.
Thanks in advance.
Ana
PsN issue after update to 4.4.0
Hi Ana,
I suggest you to test NONMEM run separately to make sure if NONMEM works
well. Besides, what is your Perl version? I've experienced several times
that Perl 5.16 didn't support PsN 4.4.0(it seems to be related with perl
modules 'moose'). I'm not sure if this helps, upgrading Perl version(5.18
is recommended) and reinstalling all essential perl modules(see PsN
website) have solved my problems.
Best regards,
Tingjie
*Tingjie Guo*
M.S. Candidate
Group of Pharmacometrics
School of Pharmaceutical Sciences
Peking University, China
Quoted reply history
On 18 July 2015 at 23:07, Ana Miranda Bastos <[email protected]>
wrote:
>
> Hi,
>
> After updating PsN, I run into the following problem when launching a
> nonmem model that used to be running. The error message is not specific
> enough for me to know how to fix it. Could anybody point me in the right
> direction?
>
> Software:
> PsN 4.4.0 on ActivePerl64 on windows 7 (64bit)
>
> Running 'C:\Perl64\bin\execute mymodel.mod' gives the following error
> message:
> "File system problem or NMtran could not be initiated (the NMtran output
> file FDATA is missing). There is no lst-file for the model in NM_run1. It
> is recommended to check the perl installation, and perl settings in
> psn.conf."
>
> Here is the beginning of the psn.conf:
>
> output_style = SPLUS
>
> perl = C:\Perl64\bin\perl.exe
> R = C:\Program Files\R\R-3.1.1\bin\R.exe
> use_keyboard=0
> use_database=0
> job_polling_interval=1
> polls_per_moshog_request=5
>
> [nm_versions]
> default=C:\nm73g64\run\nonmem.exe,7.3
> 73=C:\nm73g64\run\nonmem.exe,7.3
>
> [default_options]
> ; Options valid for all tools
> threads=5
> nmfe=1
> nm_output=phi,ext
> nmfe_options=prdefault,xmloff
>
> [...]
>
>
> Any help with this would be much appreciated.
>
> Thanks in advance.
>
> Ana
>