PROBLEM WITH THE COMPILER IN INSTALLATION OF NM7.2.0 ON A MAC OSX 10.7.3

1 messages 1 people Latest: Jun 16, 2012
Dear Carlos, The problem can be sovled by installing the "command line tools" in Xcode. (Open Xcode then go to preferences -> "downloads" - "Components" ) I had experienced the same problem with you, but I successfully installed NONMEM 7.2 on Mac OS X Lion with X code 4.3.1 using Intel fortran 11 and gfortran 4.6.2, respectively. With best regards Sang-Heon Cho M.D., Ph.D. Research Assistant Professor Department of Clinical Pharmacology and Therapeutics Seoul National University College of Medicine and Hospital Tel: 82-2-2072-4170, Fax: 82-2-742-9252 E-mail: [email protected], [email protected]
Quoted reply history
2012/3/10 Carlos Orlando Jacobo Cabral <[email protected]>: > Dear Joanna and Teijo I thank you, but I still have the same problem with > the same error message > > > > I uninstalled gfrotran with the next command > > > sudo rm -r /usr/local/gfortran /usr/local/bin/gfortran > > then I updated X Code to 4.3 version, and I installed gfortan again > (gfortran 4.6.2 for Mac OS Lion 10.7 from > http://gcc.gnu.org/wiki/GFortranBinaries), and tried to install NM7.2 again > with the command > > /bin/bash/ SETUP72 /Users/Rod/desktop/cd_nonmem/NONMEM_7.2.0 > /Applications/nm72 gfortran y /usr/bin/ar same rec i unzip > nonmem72e.zip nonmem72r.zip > > but the result was same, at last the error message: > > > gfortran: error trying to exec 'as': execvp: No such file or directory > Could not compile util/test.f90 > > ./util/dotest: line 72: gcc: command not found > Could not assemble util/test.c with gcc > > Compiler gfortran and/or install program cannot be run > Installation Aborted > > I was triying to find another solution, but didn´t succeed. So do you or > anynone else have any idea of what I am doing wrong or what I can do? > > Thank you again. > > PhD student ORLANDO JACOBO > E-mail: [email protected]; [email protected] > > > > > ________________________________ > From: [email protected] > To: [email protected]; [email protected] > CC: [email protected] > > Subject: Re: [NMusers] PROBLEM WITH THE COMPILER IN INSTALLATION OF NM7.2.0 > ON A MAC OSX 10.7.3 > Date: Fri, 2 Mar 2012 11:05:52 +0000 > > > Dear Carlos, > > Yes, I agree with Teijo that the problem is probably that you need to > install Xcode. It will be included with your OSX installation CD, or else > you can download it from the Apple Developer website (you will need to > register and/or log in). > > I had this same problem last week, and a couple of extra (and mildly > embarrassing..) problems we ran into were 1) installing a version of Xcode > that was not compatible with the OS version and 2) it not installing > properly, even though we thought we had run the installer. > > I hope that helps. > Joanna > > Joanna Lewis > PhD student > Institute of Child Health, > 30 Guilford Street, > London WC1N 1EH > 0207 905 2307 > > From: Teijo Saari <[email protected]> > Date: Fri, 2 Mar 2012 09:54:50 +0100 > To: Carlos Orlando Jacobo Cabral <[email protected]> > Cc: <[email protected]> > Subject: Re: [NMusers] PROBLEM WITH THE COMPILER IN INSTALLATION OF NM7.2.0 > ON A MAC OSX 10.7.3 > > Dear Carlos, > > One problem might be, that XCode-package is not updated (to 4.x). That has > to be done before installing NONMEM, since XCode does not update > automatically with Lion (instead Lion deletes the previous version 3.x). > > With best wishes, > > Teijo > > 2012/3/2 Carlos Orlando Jacobo Cabral <[email protected]> > > Hi NMUSERS > > I´m trying to install NONMEM 7.2 on a Mac with OS 10.7.3 and I first > installed gfortran 4.6.2 for Mac OS Lion (10.7) from the gfortran web site > http://gcc.gnu.org/wiki/GFortranBinaries#MacOS > > After I tried to install NONMEM (installation from a directory) using > a terminal window with the next command: > > /bin/bash/ SETUP72 /Users/Rod/desktop/cd_nonmem/NONMEM_7.2.0 > /Applications/nm72 gfortran y /usr/bin/ar same rec i unzip > nonmem72e.zip nonmem72r.zip > > and the complete messages that appear after enter this command are: > > > SETUP72/Users/Rod/desktop/cd_nonmem/NONMEM_7.2.0 /Applications/nm72 gfortran > y /usr/bin/ar same rec i unzip nonmem72e.zip nonmem72r.zip > CD-ROM drive is /Users/Rod/desktop/cd_nonmem/NONMEM_7.2.0 > NONMEM 7.2 directory is /Applications/nm72 > Command for FORTRAN compiles is gfortran > Optimization for Fortran compiles is y > Command to build NONMEM archive is /usr/bin/ar > Sizes is same (SIZES.f90 is always used) > Recompile is rec > All binaries will be recompiled > Interactive is i > Unzip program is unzip > Encrypted source file is nonmem72e.zip > Unencrypted file is nonmem72r.zip > > To learn how to override the defaults, enter > %SETUP72 help > > Continue (y/n) [y]?y > > directory /Applications/nm72 > Step 1a. Copy files from /Users/Rod/desktop/cd_nonmem/NONMEM_7.2.0 to > /Applications/nm72 > Step 1b. Copy files from > /Users/Rod/desktop/cd_nonmem/NONMEM_7.2.0/NONMEM_7.2.0 to /Applications/nm72 > > Installing NONMEM 7.2.0 (Enter Ctrl-C to interrupt)... > Dierectories already exist -skipping step 2a. > Choosing platform-dependent files... > os is Darwin > cpu is i386 > Will use install_Darwin > Compiler is gfortran > Will use existing finish > > === Checking compiler > Version of gfortran is: > GNU Fortran (GCC) 4.6.2 20111019 (prerelease) > Copyright (C) 2011 Free Software Foundation, Inc. > > GNU Fortran comes with NO WARRANTY, to the extent permitted by law. > You may redistribute copies of GNU Fortran > under the terms of the GNU General Public License. > For more information about these matters, see the file named COPYNG > > gfortran: error trying to exec 'as': execvp: No such file or directory > Could not compile util/test.f90 > > ./util/dotest: line 72: gcc: command not found > Could not assemble util/test.c with gcc > > Compiler gfortran and/or install program cannot be run > Installation Aborted > > > --So the error seems to be about gfortran as seen above in the last part. > And I don´t know how to solve this problem, can anybody help me > or tell me what I'm doing wrong? I thank in advance. > > > PhD-st ORLANDO JACOBO > > E-mail: [email protected]; [email protected] > > > > > -- > Teijo Saari, MD PhD > Post Doctoral Researcher > Anästhesiologische Klinik > Friedrich-Alexander-Universität Erlangen-Nürnberg > Krankenhausstrasse 12 > D-91054 Erlangen > Phone +49 9131 853 9157 > Fax +49 9131 853 9161 > Mobile +49 152 5855 4502 > email: [email protected] >