nonmem under cygwin

5 messages 3 people Latest: Mar 25, 2002

nonmem under cygwin

From: William Bachman Date: March 21, 2002 technical
From: Bachman, William" Subject:[NMusers] nonmem under cygwin Date: Thu, 21 Mar 2002 are you using the cygwin FORTRAN or are you trying to use C (via FtoC)?

nonmem under cygwin

From: Darin Perusich Date: March 21, 2002 technical
From: Darin Perusich Subject: [NMusers] nonmem under cygwin Date: Thu, 21 Mar 2002 18:02:00 +0000 has anyone had any success get nonmem working in a cygwin environment?, cygwin.com? i've successfully gotten nonmem to compile and the test that comes with the source runs successfully but when i try to run other jobs they never complete. the machine is an amd 500 mhz, 128 Mb ram, win2k. the cygwin release is version 1.3.10, gnu gcc, gnu binutils, etc. any advice is greatly appreciated -- Darin Perusich Unix Systems Administrator Cognigen Corp. darinper@cognigencorp.com

Re: nonmem under cygwin

From: Darin Perusich Date: March 21, 2002 technical
From: Darin Perusich Subject: Re: [NMusers] nonmem under cygwin Date: Thu, 21 Mar 2002 20:20:23 +0000 i'm using the cygwin fortran compiler g77, which is part of the gnu gcc (GNU Compiler Collection).

RE: nonmem under cygwin

From: Thomas G Tensfeldt Date: March 21, 2002 technical
From: "Tensfeldt, Thomas G" Subject: RE: [NMusers] nonmem under cygwin Date: Thu, 21 Mar 2002 16:16:38 -0500 Darin, I have a very nice environment under cygwin using custom perl scripts that run nonmem using the g77 compiler. The current release I'm using is the latest one, 1.3.10. The results of jobs running in that environment compare well with jobs that I run in other unix based environments, i.e. Dec fortran f77 under Dec Unix. I'm not sure why you're having problems. Perhaps you could show us how you're executing the jobs? Tom Tensfeldt Clinical PK/PD Group Pfizer Global Research & Development Groton, CT 06340

Re: nonmem under cygwin

From: Darin Perusich Date: March 25, 2002 technical
From: Darin Perusich Subject: Re: [NMusers] nonmem under cygwin Date: Mon, 25 Mar 2002 13:54:53 +0000 hi tom, i'm also looking to do a comparison between the cygwin environment and our unix systems. i was using a custom perl script to execute the jobs but they're not working as expected under cygwin so i'm using the nmfe5 script that comes with the nonmem source to execute nonmem. the only reason i can think of for the jobs not completing, at this point is that i haven't installed some package that it needs. this is what i've installed so far, cygwin 1.3.10, bzip, gettext, libintl1, libintl, libtool, GCC, make, tcsh, vim, win32api. *******