LIBDECIMAL.LIB MISSING?

3 messages 2 people Latest: Nov 30, 2019

LIBDECIMAL.LIB MISSING?

From: Mark Sale Date: November 29, 2019 technical
Dear users, I'm using NM version 7.43, trying the new ODE solver, ADVAN14 (a complex model that refuses to run with ADVAN13), but getting a compile error that it cannot find libdecimal.lib, looks like part of the Intel libraries. I'm using a pretty old Intel fortran (10.01), anyone have any experience trying to run v7.4, ADVAN14 with old Intel Fortran? thanks Mark Sale M.D. Senior Vice President, Pharmacometrics Nuventra Inc. 2525 Meridian Parkway, Suite 200 Durham, NC 27713 Phone (919)-973-0383 [email protected]<[email protected]> CONFIDENTIALITY NOTICE The information in this transmittal (including attachments, if any) may be privileged and confidential and is intended only for the recipient(s) listed above. Any review, use, disclosure, distribution or copying of this transmittal, in any form, is prohibited except by or on behalf of the intended recipient(s). If you have received this transmittal in error, please notify me immediately by reply email and destroy all copies of the transmittal.
Quoted reply history
________________________________ From: [email protected] <[email protected]> on behalf of Mark Tepeck <[email protected]> Sent: Tuesday, November 26, 2019 8:13 AM To: [email protected] <[email protected]> Subject: [NMusers] FDATA file missing WARNING: This email originated from outside of the company. Do not click links or open attachments unless you recognize the sender and are expecting the message. During my troubleshooting of a failed NONMEM run, I want to confirm the correct exclusion of some records (e.g., IGNORE CMT=2) for the input file. However, I could not find the FDATA file in the run directory. Is there any way to force NONMEM to generate a FDATA? I am also wondering about the possible causes of missing FDATA. Even the FDATA file is available, is it possible to include the column heads (e.g., ID, DV) on the top of the numbers? So, I can confirm which column is excluded or retained. In addition, I am not sure whether the dataset related warnings (e.g., DATA WARING 1, RECORD 100, DATA ITEM 11, THE DV IS NULL BUT MDV IS 0) is refereeing to the FDATA file or the raw input CSV file. In other words, the problematic record 100 represents the row 100 in the FDATA file or the CSV file? Thank you, Mark

Re: LIBDECIMAL.LIB MISSING?

From: Ekaterina Gibiansky Date: November 29, 2019 technical
Hi Mark, I had the same problem with Intel FORTRAN 11. After spending some time ( may be not enough) trying to get it going, I changed to gfortran and gcc, and did not have any problems. Regards, Katya Ekaterina Gibiansky QuantPharm LLC QuantPharm.com > On Nov 29, 2019, at 1:04 PM, Mark Sale <msale > >  > Dear users, > I'm using NM version 7.43, trying the new ODE solver, ADVAN14 (a complex m odel that refuses to run with ADVAN13), but getting a compile error that it cannot find libdecimal.lib, looks like part of the Intel libraries. I'm using a pretty old Intel fortran (10.01), anyone have any experience trying to run v7.4, ADVAN14 with old Intel Fortran? > > thanks > > > > Mark Sale M.D. > Senior Vice President, Pharmacometrics > Nuventra Inc. > 2525 Meridian Parkway, Suite 200 > Durham, NC 27713 > Phone (919)-973-0383 > msale > > > CONFIDENTIALITY NOTICE The information in this transmittal (including atta chments, if any) may be privileged and confidential and is intended only for the recipient(s) listed above. Any review, use, disclosure, distribution or copying of this transmittal, in any form, is prohibited except by or on behalf of the intended recipient(s). If you have received this transmittal in error, please notify me immediately by reply email and destroy all copies of the transmittal. >
Quoted reply history
> From: owner-nmusers f of Mark Tepeck <mark.tepeck > Sent: Tuesday, November 26, 2019 8:13 AM > To: nmusers > Subject: [NMusers] FDATA file missing > > WARNING: This email originated from outside of the company. Do not click l inks or open attachments unless you recognize the sender and are expecting the message. > > During my troubleshooting of a failed NONMEM run, I want to confirm the co rrect exclusion of some records (e.g., IGNORE CMT=2) for the input file. However, I could not find the FDATA file in the run directory. Is there any way to force NONMEM to generate a FDATA? I am also wondering about the possible causes of missing FDATA. > > Even the FDATA file is available, is it possible to include the column hea ds (e.g., ID, DV) on the top of the numbers? So, I can confirm which column is excluded or retained. > > In addition, I am not sure whether the dataset related warnings (e.g., DAT A WARING 1, RECORD 100, DATA ITEM 11, THE DV IS NULL BUT MDV IS 0) is refereeing to the FDATA file or the raw input CSV file. In other words, the problematic record 100 represents the row 100 in the FDATA file or the CSV file? > > Thank you, > > Mark

Re: LIBDECIMAL.LIB MISSING?

From: Ekaterina Gibiansky Date: November 30, 2019 technical
Hi Mark, I had the same problem with Intel FORTRAN 11. After spending some time ( may be not enough) trying to get it going, I changed to gfortran and gcc, and did not have any problems. Regards, Katya Ekaterina Gibiansky QuantPharm LLC QuantPharm.com
Quoted reply history
> On Nov 29, 2019, at 1:04 PM, Mark Sale <[email protected]> wrote: > >  > Dear users, > I'm using NM version 7.43, trying the new ODE solver, ADVAN14 (a complex > model that refuses to run with ADVAN13), but getting a compile error that it > cannot find libdecimal.lib, looks like part of the Intel libraries. I'm using > a pretty old Intel fortran (10.01), anyone have any experience trying to run > v7.4, ADVAN14 with old Intel Fortran? > > thanks > > > > Mark Sale M.D. > Senior Vice President, Pharmacometrics > Nuventra Inc. > 2525 Meridian Parkway, Suite 200 > Durham, NC 27713 > Phone (919)-973-0383 > [email protected] > > > CONFIDENTIALITY NOTICE The information in this transmittal (including > attachments, if any) may be privileged and confidential and is intended only > for the recipient(s) listed above. Any review, use, disclosure, distribution > or copying of this transmittal, in any form, is prohibited except by or on > behalf of the intended recipient(s). If you have received this transmittal in > error, please notify me immediately by reply email and destroy all copies of > the transmittal. > > From: [email protected] <[email protected]> on behalf > of Mark Tepeck <[email protected]> > Sent: Tuesday, November 26, 2019 8:13 AM > To: [email protected] <[email protected]> > Subject: [NMusers] FDATA file missing > > WARNING: This email originated from outside of the company. Do not click > links or open attachments unless you recognize the sender and are expecting > the message. > > During my troubleshooting of a failed NONMEM run, I want to confirm the > correct exclusion of some records (e.g., IGNORE CMT=2) for the input file. > However, I could not find the FDATA file in the run directory. Is there any > way to force NONMEM to generate a FDATA? I am also wondering about the > possible causes of missing FDATA. > > Even the FDATA file is available, is it possible to include the column heads > (e.g., ID, DV) on the top of the numbers? So, I can confirm which column is > excluded or retained. > > In addition, I am not sure whether the dataset related warnings (e.g., DATA > WARING 1, RECORD 100, DATA ITEM 11, THE DV IS NULL BUT MDV IS 0) is > refereeing to the FDATA file or the raw input CSV file. In other words, the > problematic record 100 represents the row 100 in the FDATA file or the CSV > file? > > Thank you, > > Mark