Installation of NONMEM in OS X El Capitan

1 messages 1 people Latest: Nov 21, 2015

Installation of NONMEM in OS X El Capitan

From: Fisher Dennis Date: November 21, 2015 technical
Colleagues, Recently, someone described a problem installation NONMEM 7.3 in the new version of the Mac operating system (El Capitan). Alison Boeckmann and I each installed successfully and Bob Bauer asked me to explain the procedure. 1. Install ElCapitan in the usual manner 2. Install Xcode Open the App store Click on "Updates” Click on "Xcode Apple Version 7.1" 3. Open Xcode — you will probably be asked to authenticate (provide a password) — this is critical — if you don’t do this, NONMEM won’t run. 4. Download and install gfortran from https://gcc.gnu.org/wiki/GFortranBinaries#MacOS https://gcc.gnu.org/wiki/GFortranBinaries#MacOS using their installer (I deleted previous versions from before doing this step; the default location is /usr/local/gfortran). Note that versions of Fortran installed in previous versions of OS X will probably not work. To confirm that gfortran works, in a terminal window, type: gfortran -v You should receive several lines of text, ending with something like: gcc version 5.2.0 (GCC) 5. Install NONMEM in the usual manner. This approach has worked for Alison Boeckmann and myself. If anyone tries it and fails, please contact me ([email protected] <mailto:[email protected]>) so that Alison and I can suggest additional steps. ################## Alison uses a different approach to install Fortran 5.2: Download and install gcc and gfortran from http://hpc.sourceforge.net sudo tar -xvf gcc-5.2-bin.tar -C / sudo tar -xvf gfortran-5.2-bin.tar -C / Regardless of the approach that you use to install gfortran, it is necessary that the PATH environment variable knows the location of gfortran. As noted above, gfortran is usually installed in /usr/local/gfortran. However, it is symbolically linked to /usr/local/bin/gfortran (and /usr/local/bin is almost always in $PATH). ################### Dennis Dennis Fisher MD P < (The "P Less Than" Company) Phone: 1-866-PLessThan (1-866-753-7784) Fax: 1-866-PLessThan (1-866-753-7784) www.PLessThan.com http://www.plessthan.com/