RE: NONMEM Unexpected result with the $LEVEL statement
Hello Leonid,
Your solution (FNLETA=0 in the $EST statement) works very well:
The EBEs for the random study effects (ETA9) make now sense: all IDs of the
same study has the same estimated ETA9 value.
Many thanks for your help
Best regards,
Thomas Dumortier
Director Pharmacometrics
Novartis Pharma AG
Postfach
CH-4002 Basel
SWITZERLAND
Phone +41 61 3240946
Fax +41 61 3241246
[email protected]
Quoted reply history
-----Original Message-----
From: Leonid Gibiansky <[email protected]>
Sent: Tuesday, August 13, 2019 10:56 PM
To: Dumortier, Thomas <[email protected]>; [email protected]
Subject: Re: [NMusers] NONMEM Unexpected result with the $LEVEL statement
You need to use FNLETA=0 option.
Thanks
Leonid
On 8/13/2019 4:39 PM, Dumortier, Thomas wrote:
> Hello
>
> I would like to model inter-study variability on the of the
> inter-subject variability with NONMEM 74
>
> A subject belongs to a study, therefore those two random effects are
> nested
>
> Following the instruction, I code as below, where ETA8 is at the
> subject level and ETA9 is at the study (STUD) level.
>
> $INPUT ID STUD TIME TIM2 TAD NT CMT EVID MDV BLOQ AMT DOSE RATE
> LIDV=DV LNDV WT0 TRT1S TRT2S PAS0
>
> ...
>
> $PK
>
> ...
>
> TVF1 = THETA(8) + ETA(8) + ETA(9)
>
> F1 = (EXP(TVF1)/(1+EXP(TVF1)))
>
> ...
>
> $LEVEL STUD=(9[8])
>
> The fit with NONMEM 743 (fortran compliler) seems correct and the
> estimates for the variance (OMEGA) of ETA8 and for ETA9 are provided.
>
> But when looking at the ETA9 values (the empirical bayes estimates), I
> notice that
>
> (1)Different subjects of the same study have different ETA9 values,
> while I would expect that all subjects of a study have same ETA9 value
>
> (2)The ETA9 value is proportional to the ETA8 value (ie, plotting ETA8
> versus ETA9 from all subjects of all studiers results in all points on
> the same diagonal line)
>
> Am I coding incorrectly ?
>
> Any help would be more than welcome
>
> Many thanks
>
> Thomas Dumortier
>
> *Thomas Dumortier*
>
> Director Pharmacometrics
>
> Novartis Pharma AG
>
> Postfach
>
> CH-4002 Basel
>
> SWITZERLAND
>
> Phone +41 61 3240946
>
> Fax +41 61 3241246
>
> [email protected] <mailto:[email protected]>__
>