Re: Covariate modelling question
Dear Fiona,
This sounds like a PsN question, but it is impossible to answer
without the example output. The mailing list does not accept long
messages or attachments, so I suggest you send the original email
with all output directly to me ( [email protected] ) so that
I can have a look.
Best regards,
Kajsa
On 02/26/2015 11:00 AM, Fiona
Vanobberghen wrote:
I posted this message a few days ago but it doesn't seem to have
been sent to the list - so I'm resending without the example
output.
Best wishes
Fiona
--
Dear all
I am attempting to do some covariate modelling, using the scm
wizard in Pirana. I have seen some results which I wasn't
expecting and would be grateful if anyone could shed any light on
it for me.
Initially, I used a forward inclusion p value of 0.1 and a
backward elimination p value of 0.05. This resulted in quite a
complex (implausible) model (we do have a reasonably large
dataset), and I decided to be more stringent, using p<0.05 for
inclusion (and the same p>0.05 for elimination at the last
step). As a shortcut, I could see from the output from the first
attempt (with p<0.1) what I expected the final model to look
like if I were to run it again with p<0.05, ie where the
process would truncate. Just to double check (and verify that
nothing would be eliminated at the last step), I re-ran the scm
wizard with the more stringent p<0.05. And the results are not
what I expected... Below I have pasted the output for the first
few forward steps from each attempt. The results are essentially
the same up until the third step, although we see some small
differences in the OFV creeping in from the second step. However,
at the fourth step, the results are completely different. This
isn't what I was expecting, based on my understanding of the model
selection process. Is this a known behaviour? Has anyone
experienced this problem and/or know why these differences might
occur? I'd be grateful for any advice.
Many thanks in advance for your help.
Best wishes
Fiona
--
Fiona Vanobberghen (née Ewings), PhD
Swiss Tropical and Public Health Institute
Socinstrasse 57, 4051, Basel, Switzerland
Tel: +41 61 284 87 41
--
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Kajsa Harling, PhD
System Developer
Department of Pharmaceutical Biosciences
Uppsala University
[email protected]
+46-(0)18-471 4308
http://www.farmbio.uu.se/research/researchgroups/pharmacometrics/