Re: Change of NSIG or R matrix

From: Nick Holford Date: October 08, 2013 technical Source: mail-archive.com
Xinting, I ignore rounding errors and failure of the covariance step when model building. Indeed you will speed up your model building by not using $COV. I build my models based on 1) change in OFV 2) plausibility of parameter estimates 3) VPCs. i would not trust parameter estimates obtained with NSIG<3. I use non-parametric bootstraps to also help in model building but would never rely on confidence intervals derived from $COV SEs. Nick
Quoted reply history
On 8/10/2013 8:57 p.m., Xinting Wang wrote: > Dear all, > > I have a naive question regarding the modeling building process in NONMEM. With more and more covariates added in the model, I often come across an error message saying that "ERROR 134", or R MATRIX SINGULAR. > > After searching from the internet, I learned that changing NSIG in $ESTIMATION and MATRIX=S in $COV would be helpful for both problems respectively. And from my own experience, it dose help with the modeling building. > > However, my concern is, I used different NSIG and MATRIX in the previous steps. Is it proper to use different NSIGs and MATRICE in a single model building? If not, could you please explain this a little bit? > > Thank you in advance! > > Best Regards > -- > Xinting > Wang -- Nick Holford, Professor Clinical Pharmacology Dept Pharmacology & Clinical Pharmacology, Bldg 503 Room 302A University of Auckland,85 Park Rd,Private Bag 92019,Auckland,New Zealand office:+64(9)923-6730 mobile:NZ +64(21)46 23 53 email: [email protected] http://holford.fmhs.auckland.ac.nz/ Holford NHG. Disease progression and neuroscience. Journal of Pharmacokinetics and Pharmacodynamics. 2013;40:369-76 http://link.springer.com/article/10.1007/s10928-013-9316-2 Holford N, Heo Y-A, Anderson B. A pharmacokinetic standard for babies and adults. J Pharm Sci. 2013: http://onlinelibrary.wiley.com/doi/10.1002/jps.23574/abstract Holford N. A time to event tutorial for pharmacometricians. CPT:PSP. 2013;2: http://www.nature.com/psp/journal/v2/n5/full/psp201318a.html Holford NHG. Clinical pharmacology = disease progression + drug action. British Journal of Clinical Pharmacology. 2013: http://onlinelibrary.wiley.com/doi/10.1111/bcp.12170/abstract
Oct 08, 2013 Xinting Wang Change of NSIG or R matrix
Oct 08, 2013 Nick Holford Re: Change of NSIG or R matrix
Oct 08, 2013 Leonid Gibiansky Re: Change of NSIG or R matrix
Oct 22, 2013 Xinting Wang Re: Change of NSIG or R matrix
Oct 22, 2013 Nick Holford Re: Change of NSIG or R matrix
Oct 22, 2013 Bob Leary RE: Change of NSIG or R matrix
Oct 22, 2013 Leonid Gibiansky Re: Change of NSIG or R matrix
Oct 23, 2013 Nick Holford Re: Change of NSIG or R matrix
Oct 23, 2013 Mark Sale RE: Change of NSIG or R matrix
Oct 23, 2013 Bob Leary RE: Change of NSIG or R matrix
Oct 25, 2013 Mark Sale RE: Change of NSIG or R matrix