Parameter Estimation in IF Conditioning Statement
Dear NONMEM users,
My goal was to add a drug effect to a disease progression model in a way that
the drug effect is different when a certain threshold concentration is exceeded
(similarly to modeling a 'hockey-stick' when performing covariate analysis).
First, I did it in the following way (partial simplified code)
$PRED
THRESH = THETA(1) ;threshold concentration
INT = THETA(2)+ ETA(1)
IF(WCMIN.LE.THRESH) SLOPE = THETA(3)+THETA(4)*CONC+ETA(2)
IF(WCMIN.GT.THRESH) SLOPE = THETA(3)+THETA(5)*CONC+ETA(2)
IPRED=INT+SLOPE*TIME
and NONMEM did not manage to estimate THRESH=THETA(1) (i.e., the initial
estimate did not change during minimization and the gradient was zero
throughout). I tried this for several different initial estimates.
I then centered the observed CONC on THRESH and run the following model because
colleagues mentioned that they have successfully run a 'hockey-stick'
estimating the threshold parameter (partial simplified code)
IF(WCMIN.LE.THRESH) SLOPE = THETA(3)+THETA(4)*(CONC-THRESH)+ETA(2)
IF(WCMIN.GT.THRESH) SLOPE = THETA(3)+THETA(5)*(CONC- THRESH)+ETA(2)
This time, NONMEM provided very reasonable estimates for all model parameters
and the covariance step was successful.
I wonder now if the centering of the variable (and hence something particular
to the data set) caused the difference in estimability of the threshold
parameter or whether NONMEN cannot estimate parameters that only occur in the
conditioning part of the IF statement (Note that after centering THRESH also
appears in another part of the code).
Could somebody please provide some insight on this? I have searched in the
NONMEM user group but could not find anything.
Mit freundlichen Grüßen / Kind regards,
Dr. Benjamin Weber
Boehringer Ingelheim Pharma GmbH & Co. KG
Translational Medicine
Tel.: +49 (7351) 54-143520
Fax: +49 (7351) 83-143520
mailto:[email protected]
Boehringer Ingelheim Pharma GmbH & Co. KG, Sitz: Ingelheim am Rhein;
Registergericht Mainz: HR A 22206; Komplementär Boehringer Ingelheim
Deutschland GmbH; Geschäftsführung: Dr. Engelbert Günster (Vorsitzender),
Ursula Fuggis-Hahn, Ralf Gorniak, Michael Klein, Dr. Martin Wanning;
Vorsitzender des Aufsichtsrates: Dr. Joachim Hasenmaier; Sitz: Ingelheim am
Rhein; Registergericht Mainz: HR B 23260
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