RE: Time-varing covariate
Hi Siwei,
If you are using an algebraic model (i.e. no differential equations), then you
can simply include it in your equation:
e.g. assuming that SBP is systolic blood pressure in your original data set:
EFF=THETA(1)+SBP*THETA(2)
If you have a differential equation model and you want the time varying
covariate to have an effect that is not a step change, you will need to
interpolate the covariate. Within your data set, you'll need a column for the
next time and the next value of the time varying covariate. Using the same
assumption that you have SBP in your data set as your time varying covariate,
you will want to make two new columns to allow for interpolation:
ID TIME NTIME SBP NSBP DV
1 0 1 110 115 5
1 1 2 115 112 3
1 2 4 112 108 4
Then to use your parameter, you will need code like the following in your $DES
section to linearly interpolate:
$DES
...
;; Current SBP
CSBP = (NSBP - SBP)/(NTIME - TIME) * (T - TIME) + SBP
...
The parameter T is the current time for the differential equation solver which
will be somewhere between TIME and NTIME. TIME is an important column name for
NONMEM.
Thanks,
Bill
Quoted reply history
From: [email protected] [mailto:[email protected]] On
Behalf Of siwei Dai
Sent: Friday, August 23, 2013 12:01 PM
To: [email protected]
Subject: [NMusers] Time-varing covariate
Hi, Dear NMusers:
I want to add a time-varing covariate in my model. For example, blood pressure
or blood flow as covariates. But I am not sure how to do it. I see some earlier
threads to discuss it but they all use complicated methods.
I am wondering if there are any new way to do it in NM 7.2? I see in the user
guide that EVID=4 can indicate physiological change. Is this what I should use?
Thank you very much for any suggestions.
Best regards,
Siwei