PDx-Pop 4.20 Update Now Available
PDx-Pop 4.20 Update
December 21, 2010
William J. Bachman, Ph.D.
Updating PDx-Pop 4.x to PDx-Pop 4.20:
1. Quit the PDx-Pop program if currently running.
2. Copy to a backup folder any of the files with identical names in
your PDx-Pop installation directory (if you installed PDx-Pop to the
default directory, the directory is c:\pdxpop4) as those found in the
ftp folder (ftp://ftp.globomaxnm.com/Public/pdxpop/PDx-Pop4.2/).
3. Download all the files found at
ftp://ftp.globomaxnm.com/Public/pdxpop/PDx-Pop4.2/
<ftp://ftp.globomaxnm.com/Public/pdxpop/PDx-Pop4.2/> to your PDx-Pop 4
installation directory. Move the files 501.csv and wamexample.ctl to
the example1 directory under the installation directory.
4. Start the program and you are now ready to use PDx-Pop 4.20.
Update 4.20 is cumulative with update 4.10 (it contains the updates
found in 4.10). There is no need to precede update 4.20 with update
4.10 if you have not already updated to 4.10.
Software Bugs fixed in PDx-Pop 4.20:
1. A bug was corrected that affected all runs that used multiple
simultaneous threads including selecting multiple CPU's from the
Model/Run Tab or Evaluation Methods that used multiple simultaneous
threads by default including Multiple MCMC Runs and Initial Parameters
Variation. If the control files contained multiple $TABLE records, the
runs would fail and PDx-Pop would "hang" (the program would stop
functioning and could only be closed from the Windows Task manager).
The bug fix corrects the bug and also limits the number of multiple
simultaneous threads to the total number of CPU's available on the
system to prevent excess memory use which could lead to skipped runs.
2. Bugs were fixed that caused Bootstrap, Multiple MCMC chains, and
Initial Parameter Variation evaluation methods to fail on Linux and Mac
OS X.
New features have been added to PDx-Pop 4 in the new updated version,
PDx-Pop 4.20:
Wald Approximation Method (WAM) Analysis
Introduction to WAM Analysis
The Wald Approximation Method (WAM) as implemented in PDx-Pop is based
upon the publication by KG Kowalski and MM Hutmacher, "Efficient
Screening of Covariates in Population Models Using Wald's Approximation
to the Likelihood Ratio Test.", JPP 2001;28:253-275.
The WAM is an efficient covariate search algorithm that exploits
information contained in a full model fit (all covariates included
simultaneously) to guide selection of competing reduced models for
evaluation. The main goal of any covariate search algorithm is to find
a parsimonious model for prediction. The WAM generally requires fewer
model runs than stepwise procedures to identify a final reduced model
and provides a set of competing parsimonious models.
See the ReleaseNotes.pdf file for more information.