Re: distribution assumption of Eta in NONMEM

From: Nick Holford Date: May 28, 2010 technical Source: mail-archive.com
For estimation NONMEM estimates one parameter to describe the distribution of random effects -- this is the variance (OMEGA) of the distribution. Thus it makes no explicit assumption that the distribution is normal. AFAIK any distribution has a variance. For simulation NONMEM assumes all etas are normally distributed. If you use OMEGA BLOCK(*) then the distribution is multivariate with covariances but still normal. Nick Ethan Wu wrote: > I could not find in the NONMEM help guide that explicitly mentioned a normal distribution is assumed, only it was clearly mentioned of assumption of mean of zero. > > ------------------------------------------------------------------------ > *From:* Serge Guzy <[email protected]> > *To:* Ethan Wu <[email protected]>; [email protected] > *Sent:* Fri, May 28, 2010 1:25:24 PM > *Subject:* RE: [NMusers] distribution assumption of Eta in NONMEM > > As far as I know, this is the assumption in most of the population programs like NONMEM, SADAPT, PDX-MC-PEM and SAEM. Therefore when you simulate, random values from a normal distribution are generated. However, you have the flexibility to use any transformation to create distributions for your model parameters that will depart from pure normality. For example, CL=theta(1)*exp(eta(1)) will generate a log-normal distribution for the clearance although the random deviates are all from the normal distribution. > > I am not sure how you can simulate data sets if you are using the non parametric option that is indeed available in NONMEM. > > Serge Guzy; Ph.D > > President, CEO, POP_PHARM > > www.poppharm.com http://www.poppharm.com/ > > *From:* [email protected] [ mailto: [email protected] ] *On Behalf Of *Ethan Wu > > *Sent:* Friday, May 28, 2010 9:08 AM > *To:* [email protected] > *Subject:* [NMusers] distribution assumption of Eta in NONMEM > > Dear users, > > Is it true NONMEM dose not assume Eta a normal distribution? > > If it does not, I wonder what distribution it assumes? I guess this is critical when we do simulations. > > Thanks > > ------------------------------------------------------------------------ > > The information contained in this email message may contain confidential or legally privileged information and is intended solely for the use of the named recipient(s). No confidentiality or privilege is waived or lost by any transmission error. If the reader of this message is not the intended recipient, please immediately delete the e-mail and all copies of it from your system, destroy any hard copies of it and notify the sender either by telephone or return e-mail. Any direct or indirect use, disclosure, distribution, printing, or copying of any part of this message is prohibited. Any views expressed in this message are those of the individual sender, except where the message states otherwise and the sender is authorized to state them to be the views of XOMA. -- Nick Holford, Professor Clinical Pharmacology Dept Pharmacology & Clinical Pharmacology University of Auckland,85 Park Rd,Private Bag 92019,Auckland,New Zealand tel:+64(9)923-6730 fax:+64(9)373-7090 mobile:+64(21)46 23 53 email: [email protected] http://www.fmhs.auckland.ac.nz/sms/pharmacology/holford
May 28, 2010 Ethan Wu distribution assumption of Eta in NONMEM
May 28, 2010 Serge Guzy RE: distribution assumption of Eta in NONMEM
May 28, 2010 Matt Hutmacher RE: distribution assumption of Eta in NONMEM
May 28, 2010 Nick Holford Re: distribution assumption of Eta in NONMEM
May 28, 2010 Jurgen Bulitta RE: distribution assumption of Eta in NONMEM
May 29, 2010 Nick Holford Re: distribution assumption of Eta in NONMEM
May 29, 2010 Mats Karlsson RE: distribution assumption of Eta in NONMEM
May 29, 2010 Doug J. Eleveld RE: distribution assumption of Eta in NONMEM
May 30, 2010 Mats Karlsson RE: distribution assumption of Eta in NONMEM
May 30, 2010 Nick Holford Re: distribution assumption of Eta in NONMEM
May 31, 2010 Nick Holford Re: distribution assumption of Eta in NONMEM
May 31, 2010 Mats Karlsson RE: distribution assumption of Eta in NONMEM
May 31, 2010 Leonid Gibiansky Re: distribution assumption of Eta in NONMEM
May 31, 2010 Michael Fossler RE: distribution assumption of Eta in NONMEM
Jun 01, 2010 Jeroen Elassaiss-Schaap RE: distribution assumption of Eta in NONMEM
Jun 01, 2010 Michael Fossler RE: distribution assumption of Eta in NONMEM
Jun 01, 2010 Mats Karlsson RE: distribution assumption of Eta in NONMEM
Jun 01, 2010 Jeroen Elassaiss-Schaap RE: distribution assumption of Eta in NONMEM
Jun 01, 2010 Jakob Ribbing RE: distribution assumption of Eta in NONMEM
Jun 01, 2010 Ethan Wu Re: distribution assumption of Eta in NONMEM
Jun 01, 2010 William Bachman RE: distribution assumption of Eta in NONMEM
Jun 02, 2010 Mats Karlsson FW: distribution assumption of Eta in NONMEM