RE: Minimization terminated ?
Dear NMusers,
There have been some elegant references posted to the usersnet in response to
this question. However, one question has generally gone unanswered. Navin tells
us that NONMEM says MINIMIZATION TERMINATED DUE TO ROUNDING ERRORS (ERROR=134);
then he change the SIGDIGITS to a lower value (this is generally NSIG=2) and
MINIMIZATION SUCCESSUFUL shows up along with the STANDARD ERROR OF ESTIMATE.
This is actually one of the recommended tips in Dr. Bonate's book for Error
134. Dr. Bonate further explains "If the rounding error is a variance component
then this is usually an acceptable solution".
<?xml:namespace prefix = o ns = "urn:schemas-microsoft-com:office:office" />
Kindly note that almost always the parameter estimates are identical between
the run that had minimization terminated and the job that ran successfully with
NSIG=2. Could someone kindly teach us what makes NSIG=3 so important. As an
example, is a volume estimate of 96.3 L that much better than 93 L.
Please advice...Mahesh
Quoted reply history
-----Original Message-----
From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] Behalf Of Mark Sale - Next
Level Solutions
Sent: Friday, July 20, 2007 9:05 PM
Cc: nmusers
Subject: RE: [NMusers] Minimization terminated ?
Nick,
I'm interested in exactly what you mean by "unreliable". Is it
sensitivity/specificity for a "bad" model? I suspect that we all would prefer
if our models converge and have a successful covariance step. And so (I
think), models that pass these tests are "better" models than those that don't
(everything else being equal). But, if we are unable to find a model that
passes these tests, we resort to rationalizing that it really doesn't make any
difference, anyway, and so I can move on. You, I, and others have generated
data that support this. On the other hand, Stuart would, I'm pretty sure,
suggest that models that fail a covariance step should not be considered final,
and would cringe at the idea of accepting as final a model that did not
converge. I'd also suggest it might be hurdle in getting a paper published.
(I'll let the regulatory agencies speak for themselves on this matter) So, I'd
suggest that convergence and a covariance step are valuable information and
should not be discarded.
But, I very much support the value of visual predictive checks, and NPDE. I'd
like to add PPC, especially if one checks both a point estimate (AUC, Cmax,
Cmin) and some measure of variability (SE of AUC etc), since an artificially
large variability can fool PPC.
Mark Sale MD
Next Level Solutions, LLC
www.NextLevelSolns.com
-------- Original Message --------
Subject: Re: [NMusers] Minimization terminated ?
From: Nick Holford <[EMAIL PROTECTED]>
Date: Fri, July 20, 2007 5:04 pm
To: nmusers <[email protected]>
Navin,
NONMEM is quite unreliable when it comes to deciding if it has
converged. Minor changes in initial estimates with essentially no
difference in the final estimates and OBJ can produce 1) SUCCESSFUL +
COVARIANCE 2) SUCCESSFUL + FAILED COVARIANCE 3) TERMINATED.
My guess this is because of numerical rounding errors (not the ones
that NONMEM refers to in its error message) so that essentially it
becomes a random event which of these outcomes you get. The bottom
line is NOT to pay attention to NONMEM's declarations of success but
to focus on whether the parameters make sense, whether the fits look
good, does a VPC look OK
http://www.page-meeting.org/page/page2005/PAGE2005P105.pdf
and even (if you have got lots of spare time) does the npde fail to
reject the null.
http://www.page-meeting.org/pdf_assets/9146-ecomets_a4page07.pdf
Several investigations of bootstraps have shown that it makes little
difference if you include successful runs only or if you include all
runs. The advantage of all runs is that is simpler to process the
results and perhaps the confidence intervals are more precisely
estimated
because you have more runs.
http://www.cognigencorp.com/nonmem/nm/99jul152003.html
http://www.nature.com/clpt/journal/v77/n2/abs/clpt200514a.html
http://www.page-meeting.org/?abstract=992
Nick
navin goyal wrote:
>
> Dear NM Users,
> I am using trying to model some POPPK data in NONMEM vi
> Sometimes I get the following message in the output file
>
> MINIMIZATION TERMINATED
> DUE TO ROUNDING ERRORS (ERROR=134)
> NO. OF FUNCTION EVALUATIONS USED: 1103
> NO. OF SIG. DIGITS UNREPORTABLE
>
> But when I change the SIGDIGITS to a lower value the minimization is
successful. What exactly
is happening in this case ? Is there something I am missing out?
>
> what about the parameter estimates obtained in such a run ?
>
> Another question related to this is that when I bootstrap a model in
wings for nonmem WFN, I
get few runs with similar message where in it also says the same
message as above
..MINIMIZATION TERMINATED DUE TO ROUNDING ERRORS (ERROR=134) NO. OF
SIG. DIGITS UNREPORTABLE.
> This means that I discard these runs from the calculations ?
>
--
Nick Holford, Dept Pharmacology & Clinical Pharmacology
University of Auckland, 85 Park Rd, Private Bag 92019, Auckland, New
Zealand
n.holford http://email.secureserver.net/pcompose.php#Compose @auckland.ac.nz
tel:+64(9)373-7599x86730 fax:+64(9)373-7090
www.health.auckland.ac.nz/pharmacology/staff/nholford