RE: NONMEM ODE solver
Hi Juergen
The LSODA solver is also implemented in the odesolve package in R and used
together with nlme for mixed-effects modeling in nlmeODE.
I don't think you will find many PKPD programs with more well-tuned ODE solvers
for mixed-effects modeling compared to NONMEM. You might also want to take a
look at programs in other scientific areas besides PKPD since I've heard there
has been quite a bit of improvements in the ODE solver field especially tuned
for estimation problems.
Best
Chris
________________________________
Fra: [EMAIL PROTECTED] på vegne af Jurgen Bulitta
Sendt: sø 27-05-2007 18:19
Til: [email protected]
Emne: Re: [NMusers] NONMEM ODE solver
Dear Dr Sale,
ADAPT (including Adapt II (Rel. 4), Adapt V, and S-Adapt) uses the LSODA
(Livermore Solver for
Ordinary Differential equations with Automatic method switching for stiff and
nonstiff problems).
According to the Adapt user guide:
"The ability of LSODA to detect stiffness and switch between Adam's and Gear's
methods,
together with its capability to control the step size and order of the selected
method, makes
this program [ADAPT] the most robust we know of for this application."
I have not yet run a head to head comparison of the stability of the ODE solver
in Adapt
and NONMEM on the same project myself. However, some of my colleagues told me
that
they found the LSODA in Adapt very robust. I would be happy, if someone could
share
his/her opinion on the robustness of ODE solvers e.g. implemented in PKPD
programs.
Best regards
Juergen
-----------------------------------------------
Juergen Bulitta, PhD, Post-doctoral Fellow
Pharmacometrics, University at Buffalo, NY, USA
Phone: +1 716 645 2855 ext. 281, [EMAIL PROTECTED]